Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01852 ATGGGCGGAATAGGAAAGACAACTCTTGCATCTGTGTTGTATGACAGAATCTCATATCAGTTTGATGCTTGCTGTTTCATTGAGAACTTCAGCGAAATTTATAGAAATAGTGGTGGTAGATATGGTGGTGCTACTGCTGTGCATAAAAGAATTCTTTGTCAAACTATGGAAGAAAAAAATCTAGATGTATACAGTCCTTCAGAAATATCGGGAATTGGAGAAGTAGACGTTAAAGCAATAGTTCTAGATCAAAAGGAGGATGGCTTCAATTTCAATAATTTGAGTGCCGAGGATTTATCAAAAATGGGACGACTGAAACTGCTCATATTATATCATAAGAATTTTTCAGGAAGTCCTGTATCACTCTCGAATTCCCTATGTTATTTTTCATGGGATGGTTATCCTTTCACTTCTCTGCCATTACATTTTCAGCAATCTGACCTTGTTGAATTGAATATGCCTAATAGCAGCGCGGAAAAACTCGACTTCAATGGTGGGTCAAGTTCAAGTTCGTTGAGAGTTCTTCGTCTCTCTGGGTGTACCAAACTTGAAAACTCTCCAGATTTTTCAAGAGCATTTAATCTGGAGTACCTTGATATGGATCGATGTATAAGTTTATCCACAATTCATGAATCCATTGGGGCTCTTGTAAAGCTTATATTCTTAAGTTTGAGATACTGCACAAATCTTGTTGGAATACCTGATGGCCTTAATCGCATGGCATCTCTTACAACTCTAGATCTATATGGCTGCTCAAAATTTGAAAATCTTCCCCTGAGACTTTTCAATTGTTCGTCTCCTCTGGAATATTTGATTTTTCTCGACTTAAGCTTTTGCAATATTTCTGAAGTACCTTGTTCTATTGGAGAATTAAGATACAAATTTGATGTATTTATCAGTTTTAGAGGTCTTGACACCCGCAACACCTTTGTTAACCATCTCTATGCTCATCTCACTAGAAAGGGTATTTCAACCTTCATGGATGACAAATCACTTCAGAAAGGTGAGTTCATTTCACCCCAACTTTTGCAGGCAATTAAAGATTCGAGGCTTTCTATCGTTGTCTTCTCGAAACATTATGCTTCATCAACATGGTGTTTGGATGAAATGGCTGCTATTTATGAATCCAGTAATAGATTGAAACAAGTTGTTTTCCCTGTTTTCTATGACATTGATCCATCTCATGTAAGAAAACAAAGTGGAGTGTATGAGGATGAGTTTGCTTTACACTTTATTACATTTGGACATCGTTCACACAAGGTTGCTCGATGGAGGAGAGCTATGACTTCTTTGGCTGGAAGAGCTGGTTGGGATGTTAGGAATCAGCCAGAGTTTGAAAAGATAGAACTAATTGTTCAGGCCGTGATAAAAATATTGGGTCATAAATTCTCAATGTCTGCTGATGACCTTATTGGAATACAAACTCATTTAGAAGCATTAGAAAGCCTTTTAAAACCAAGCTCAAAGGATGATAGTTTTCAAGTTTTAGGAATATGGGGCATGGGTGGAATAGGAAAGACAACTCTTGCAACTGTCTTGTATGACCGAATCTCATATCAGTTTGATGCTTGCTGTTACATTGAAAATGTTCGCAAACTTTACGAAGATGGCGGTGCTCGTGCTTTGCAGAAACAAATTCTCTGTCAAACTATAGAAGAAAAAATTCTAGACACGTACAGTCCTTCTAAAATAGCAAGCATTGTACGGGGACAGTACCCGGTACGATACTGGTACCGGTACGAGAATACGACATTTTTAGAAAAGAAAGCAATAGAGGCTGAAGCCATAATTCTTAATCTGAAAGAGGAAGACTTCGAATTCAATGACTTGAGGGCTGAAGATTTGCCAAAAATGGAGAGCTTGAAACTGCTTATATTAAATCATAAGAATTTTTCTGGAAGACCCTCATTTCTTTCTAATTCCCTGCGTTATCTTTTGTGGAATGGTTACCCTTTCATTTCTTTGCCGTCAAATTTTCAACCATATCGCATTGTTGAATTGAATATGCCTCACAGCAGCGTTGAACAAGTATGGGCAGACATCCAGCAACTACCTTATTTGAAAAGGATGGATCTTAGCAACTCTAAAAATCTCAAGAGGACCCCATGCTTTAAAGGGATGCAAAAGCTTGAGCGACTAGATTTTTCTGGATGCATAAGCTTATATGATGTGCATCCATCAATTGGACTTCTTAGAGAACTTCAATTCTTGAGCTTGCAGAACTGTGTCAGTCTGGTCTGCTTTGAGTTTGGTAGAGTATCAAAGTCAAGTTCTCTCAGAGTTCTGTGTCTCTCTGGTTGCACAAAACTTGAAAATACTCCAGATTTTGAGGGATTATTAAATCTTGAGTATCTTGACATGGATCAGTGCACAAGTTTATATACAATTCATAAATCTGTTGGGGATCTTACAAAGCTTAGATTCTTAAGTTTGAGAGGCTGCACAAATCTTGTCAGAATACCTGACAGCTTTAACGATATGACAAATCTTATGACACTAGAATTATGCGGCTGCTCTAGATTCACGAATTTTCCGCTGGGATCTATATCCAGTTCTCATACTCAGCAATCTTTGATTTCTCTTGACTTAAGCTTTTGCAATATTTCTATTGTACCTGATGCTATTGGAGAGTTAAGGAGTTTAGAGAGGCTAAATTTACAGGGCAATAACTTCACTGAACTACCCTGTACCATCCAAAGACTTTCCAGTCTAGCATATTTAAACTTGTCACATTGTCATAGGCTTCAAATTTTGCCTTTGTTACCAACAGAAAGTGGTCCATCAGATTCAGTGGGAAGATATTTTAAAACAAAGTCTGGATCCCATTATCACAGGGGTTCAATAATAAGGATAAAGGAGTCTGGTAATATGCTTGTCGACTGGTTCGGTTTTGTTTTTTGTATAGCATTTAAGGTGAGCAATCATTCTGAAGTGTCTGATTCTCCTCATCAATCGCTTTCCTCACCAATGCCACATCCTTTTTATCTTTCTTTTGAGAGTGAATGCACAGAAGAATACTTTGATATACCACTTAATTTGGAACAGAATATGGTTGATGGCAAATATTATATTTGGACAATCTATATCTCTCGGGAACACTGCCATTTTGTGAAAACAGGAGCACAAATCACATTTAAAGCTCGCCAAGGTTTGATTATCAAGAAATGGGGATTGCGTGCCCTAACCAAGGAAAACATAGAGGGCTTAAAAGTGGAACTGACCATGCGTTCTCCTATACATATTGCGAAAGTAGAAGAAAGCAGCATCAGTAGTAGCTTTGAGCCTAAAATCCAACTCCCTTACAATTGGTTTGTTTCTGATGAAGATGAAGCCGAGAAGGATGGAGCCAAGGGGAAAGAAACTGATCTCTTTAATCTTGGCCTTTTTACTGGAAGTCGATAA 3402 0.3789 MGGIGKTTLASVLYDRISYQFDACCFIENFSEIYRNSGGRYGGATAVHKRILCQTMEEKNLDVYSPSEISGIGEVDVKAIVLDQKEDGFNFNNLSAEDLSKMGRLKLLILYHKNFSGSPVSLSNSLCYFSWDGYPFTSLPLHFQQSDLVELNMPNSSAEKLDFNGGSSSSSLRVLRLSGCTKLENSPDFSRAFNLEYLDMDRCISLSTIHESIGALVKLIFLSLRYCTNLVGIPDGLNRMASLTTLDLYGCSKFENLPLRLFNCSSPLEYLIFLDLSFCNISEVPCSIGELRYKFDVFISFRGLDTRNTFVNHLYAHLTRKGISTFMDDKSLQKGEFISPQLLQAIKDSRLSIVVFSKHYASSTWCLDEMAAIYESSNRLKQVVFPVFYDIDPSHVRKQSGVYEDEFALHFITFGHRSHKVARWRRAMTSLAGRAGWDVRNQPEFEKIELIVQAVIKILGHKFSMSADDLIGIQTHLEALESLLKPSSKDDSFQVLGIWGMGGIGKTTLATVLYDRISYQFDACCYIENVRKLYEDGGARALQKQILCQTIEEKILDTYSPSKIASIVRGQYPVRYWYRYENTTFLEKKAIEAEAIILNLKEEDFEFNDLRAEDLPKMESLKLLILNHKNFSGRPSFLSNSLRYLLWNGYPFISLPSNFQPYRIVELNMPHSSVEQVWADIQQLPYLKRMDLSNSKNLKRTPCFKGMQKLERLDFSGCISLYDVHPSIGLLRELQFLSLQNCVSLVCFEFGRVSKSSSLRVLCLSGCTKLENTPDFEGLLNLEYLDMDQCTSLYTIHKSVGDLTKLRFLSLRGCTNLVRIPDSFNDMTNLMTLELCGCSRFTNFPLGSISSSHTQQSLISLDLSFCNISIVPDAIGELRSLERLNLQGNNFTELPCTIQRLSSLAYLNLSHCHRLQILPLLPTESGPSDSVGRYFKTKSGSHYHRGSIIRIKESGNMLVDWFGFVFCIAFKVSNHSEVSDSPHQSLSSPMPHPFYLSFESECTEEYFDIPLNLEQNMVDGKYYIWTIYISREHCHFVKTGAQITFKARQGLIIKKWGLRALTKENIEGLKVELTMRSPIHIAKVEESSISSSFEPKIQLPYNWFVSDEDEAEKDGAKGKETDLFNLGLFTGSR 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01852 1133 Gene3D Ribonuclease Inhibitor 86 267 IPR032675 -
Mepo3g01852 1133 Gene3D Ribonuclease Inhibitor 853 937 IPR032675 -
Mepo3g01852 1133 Gene3D Ribonuclease Inhibitor 754 852 IPR032675 -
Mepo3g01852 1133 Pfam Leucine rich repeat 857 913 IPR001611 GO:0005515
Mepo3g01852 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 569 IPR027417 -
Mepo3g01852 1133 SUPERFAMILY Toll/Interleukin receptor TIR domain 289 437 IPR035897 -
Mepo3g01852 1133 Gene3D - 290 461 IPR035897 -
Mepo3g01852 1133 PRINTS Disease resistance protein signature 495 510 - -
Mepo3g01852 1133 PRINTS Disease resistance protein signature 899 915 - -
Mepo3g01852 1133 ProSiteProfiles TIR domain profile. 293 459 IPR000157 GO:0007165
Mepo3g01852 1133 FunFam Disease resistance protein (TIR-NBS-LRR class) 292 461 - -
Mepo3g01852 1133 Gene3D - 462 580 IPR027417 -
Mepo3g01852 1133 Gene3D - 1 85 IPR027417 -
Mepo3g01852 1133 Gene3D Ribonuclease Inhibitor 589 753 IPR032675 -
Mepo3g01852 1133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 37 IPR027417 -
Mepo3g01852 1133 SMART till_3 294 434 IPR000157 GO:0007165
Mepo3g01852 1133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 62 269 IPR044974 GO:0006952
Mepo3g01852 1133 SUPERFAMILY L domain-like 614 919 - -
Mepo3g01852 1133 SUPERFAMILY L domain-like 91 299 - -
Mepo3g01852 1133 Pfam TIR domain 294 458 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01852 Mepo-Chr3 27152762 27182744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01852 759 919 WRKY Transcription Factor Family AT4G12020 34.568 6.82e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01852 - - tpra:123891889 599.356