Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01849 ATGTCCCGTTCAGCCACCACATTGATCGTCACCGTCGCCGCCTTGTGTTTCCTTTTACAATCCGAAGCCAAAACAATCGACCCGTACAAGGTTCTTGGGGTTGATAAAAGTGCAAGTCAACGAGAAATTCAGAAGGCTTTTCATAAACTCTCTCTTCAATATCACCCTGACAAGAACAAGGCTAAGGGTGCACAAGAGAAGTTTGCTCAGATAAATAATGCGTACGAGATTTTATCTGATGAACAAAAGAGAAAGAATTATGACTTATATGGAGACGAGAAAGGAAATCCTGGATTTGAAGCTGGTCATCCGGGAGGTTATGGTGGTCCTGGTGGATTTAACTTCAGACCAGGGGAACAACAATGGGGTAGGGGTGACCAGGGAGGCTCTAAGTCATTCTCCTTTTCCTTTGGCGGCGGCTCTGGTGATTCAAATTCTTTTGGATTTGGTTTGGATGATCTTCTTGGAAACTTTTTTGGTGATTTTGGCAGTTCATTTAGGTCTCAATCATCTCAATCTGGGTCCAAGAGTTCCCCCAAAAGTTTTAAGGCAATAAATTCAAATATCTACAAGAAAGAAATAGTTGATGAAGGAATGACTTGGCTTTTGTTATCTTATTCACCCTCTTTGAGGGGCATCCAACACTTTGAGTCCATTATAGGGGAGGTTGCTGGTACACTGCAAGGAGCTTTGAAGGTTGGAAGCATTAACTGTGAAAAGGAAGTCTCATTCTGTAAGGAGCTTGGCGTATATCCGCGTAAAGCTCCAAGGCTTTTTGTTTATTCTTACAAGGAGAATGAAAAGGGTTCTCTGGTGGAGTACGGCGGTGACTTGGCTGTCAAGGATTTGAAAGCTTTCTGTCAACAACACTTGCCAATGTTTTCAAAACGGACCGACTTGAATCAACTTGATCAATTTAGCACTGCTGAAAAGTTACCAAGGGTGCTGCTTCTCTCAACCAAAAAGAACACTCCTGTAATTTGGCGTGTTCTTAGTGGCTTGTATCGCAAACGCATTGCCTTCAGTGATGTACAGGTTCATGATGATTCTGATTCGCGAGTGAGAAAGATAGGTGTTGATGCACTTCCAGCTCTTGTAGGTTGGCTACCTAACGGAGAAAAGCTCATTCTGAAAACAGGGGTTTCTGTGAAAGATGTAAAATCTGGTGTACAAGATCTTAGTAAGATACTTGATAGTTTTGAGAAAGTAAGTAAAAAGGAAACATCAAGTCAGTCCAAGAAAGAACAAGCTGATTCAGAAGACAAACCTATTCAGTTGCTTTCTCGGTCAAACTTTGAGGCTCTTTGTGGGGAGAGAACTCCAGTATGCGTAATTGGTGCCTTTAGATCTTCCAAAGCAAGGGAAAAGCTAGAATCACTTCTCGCTTTGGTCTCACAGAAGTCCTTGTCAAGAAAACCAAATGGAAGCGGCAGCTCTAGGGACTCCATTTCCTATGGTCTCTTAGATTCTTCAAAGCAACAACAATCCTTTCTGGATGCATTTGACAAAACAGGTTATAAATCATCAGATAAGTTATTGATTGCTTACAAACCTCGGAAAGGGAAATTCACTGTATTTACAGGTGAAATGACAATAGAGGAAGTAGAGAATTTTATCAGCTCCGTTCTAAGCGGAGATATACCATTTAGGGAAACACATAAGAAGCCTGTACTCAAATAG 1680 0.4155 MSRSATTLIVTVAALCFLLQSEAKTIDPYKVLGVDKSASQREIQKAFHKLSLQYHPDKNKAKGAQEKFAQINNAYEILSDEQKRKNYDLYGDEKGNPGFEAGHPGGYGGPGGFNFRPGEQQWGRGDQGGSKSFSFSFGGGSGDSNSFGFGLDDLLGNFFGDFGSSFRSQSSQSGSKSSPKSFKAINSNIYKKEIVDEGMTWLLLSYSPSLRGIQHFESIIGEVAGTLQGALKVGSINCEKEVSFCKELGVYPRKAPRLFVYSYKENEKGSLVEYGGDLAVKDLKAFCQQHLPMFSKRTDLNQLDQFSTAEKLPRVLLLSTKKNTPVIWRVLSGLYRKRIAFSDVQVHDDSDSRVRKIGVDALPALVGWLPNGEKLILKTGVSVKDVKSGVQDLSKILDSFEKVSKKETSSQSKKEQADSEDKPIQLLSRSNFEALCGERTPVCVIGAFRSSKAREKLESLLALVSQKSLSRKPNGSGSSRDSISYGLLDSSKQQQSFLDAFDKTGYKSSDKLLIAYKPRKGKFTVFTGEMTIEEVENFISSVLSGDIPFRETHKKPVLK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01849 559 Gene3D DnaJ domain 24 173 IPR036869 -
Mepo3g01849 559 SMART dnaj_3 26 83 IPR001623 -
Mepo3g01849 559 Coils Coil 61 81 - -
Mepo3g01849 559 FunFam Molecular chaperone DnaJ 24 170 - -
Mepo3g01849 559 Gene3D Glutaredoxin 180 298 - -
Mepo3g01849 559 SUPERFAMILY Chaperone J-domain 23 116 IPR036869 -
Mepo3g01849 559 SUPERFAMILY Thioredoxin-like 183 291 IPR036249 -
Mepo3g01849 559 PANTHER DNAJ PROTEIN ERDJ3A 8 559 - -
Mepo3g01849 559 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Mepo3g01849 559 CDD DnaJ 27 80 IPR001623 -
Mepo3g01849 559 PRINTS DnaJ domain signature 83 102 IPR001623 -
Mepo3g01849 559 PRINTS DnaJ domain signature 47 62 IPR001623 -
Mepo3g01849 559 PRINTS DnaJ domain signature 29 47 IPR001623 -
Mepo3g01849 559 PRINTS DnaJ domain signature 63 83 IPR001623 -
Mepo3g01849 559 ProSiteProfiles dnaJ domain profile. 27 91 IPR001623 -
Mepo3g01849 559 Pfam DnaJ domain 27 88 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01849 Mepo-Chr3 27102002 27105720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01849 29 90 C2H2 Transcription Factor Family AT1G74250 42.647 2.45e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01849 - - gmx:100796871 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01849 3 27102002 27105720 Mepo3g01849 3 27102002 27105720 ECH