Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01813 ATGGGTTCCACTCGCTCAGATGGCTCTGCCACACACAAAGAACGCTTAAGATGGACACAACAACTCCATGATCTCTTTGTAGAGGCTGTAAATAGGCTTGGGGGGCCAGATAGGGCAACACCAAAAGGTATATTGAAAGGAATGAAGGCTATGGGGGTTTCAGAATTGAAAATATTACACGTCAAAAGCCACTTGCAGAAATACAGGATCTCCAAATTGATTCCAGAATCCACTACAAGAGGAAAAATTGAGAAGAGAAGCATATCAGATATACTGCCAAATTTCTGTTCTATATCTGCTCTTCAGTTAAAAGAAGTCCTTCAAATGCAGGCAGAGGTGCAAAAACGCATGAGTGATAAAGTTGAGGTTCAAAAAAGCTTGAAGCTGAAAATTGAAGCACAAGGAAAGTACCTAGACAGAATTGGACAAAGTAATCAAATCAAAACAATTACAAGAAAAGCTTGCAAGCCTTTTGTTGGTAAAGCGACACCTCTGCCCTCTCTTTCTGAGGACTCTGAATCCTTTAAAACACAATCCGAAGAAGAACATCGAGCAGCGAGAAAGCAAAAGGTCACAAATGAGAATGTTTTTCCTATAGGTTTTGAACTAGGATCATCCACTACCTCAGAATTCAGTAACCAAACCTGGAACCTTTCTTGGAGTCAGCTGGCTGAAGCAACCTACCAATCACCTTTGGTGCCTAGTTTCTTATTATAG 717 0.4073 MGSTRSDGSATHKERLRWTQQLHDLFVEAVNRLGGPDRATPKGILKGMKAMGVSELKILHVKSHLQKYRISKLIPESTTRGKIEKRSISDILPNFCSISALQLKEVLQMQAEVQKRMSDKVEVQKSLKLKIEAQGKYLDRIGQSNQIKTITRKACKPFVGKATPLPSLSEDSESFKTQSEEEHRAARKQKVTNENVFPIGFELGSSTTSEFSNQTWNLSWSQLAEATYQSPLVPSFLL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01813 238 Pfam MYB-CC type transfactor, LHEQLE motif 102 143 IPR025756 -
Mepo3g01813 238 MobiDBLite consensus disorder prediction 174 189 - -
Mepo3g01813 238 Gene3D - 12 73 - -
Mepo3g01813 238 MobiDBLite consensus disorder prediction 162 189 - -
Mepo3g01813 238 NCBIfam myb-like DNA-binding domain, SHAQKYF class 13 71 IPR006447 GO:0003677
Mepo3g01813 238 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 190 IPR044848 GO:0003700
Mepo3g01813 238 SUPERFAMILY Homeodomain-like 12 70 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01813 Mepo-Chr3 26666865 26669928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01813 9 138 G2-like Transcription Factor Family AT4G28610 49.265 2.82e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo3g01813 Myb_CC_LHEQLE 3.6e-15 No_clan