Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01811 ATGGAAGAACCCAATTCCGCCAACGTTGGAACTTCTCAACCAAACGAAAATGCTCAAGTCTCACCGAACCGTCCACGTGAGTCTCCGAGCGTGAGCATCGCCTACCGGAGCTTCGCGCGGCATATCAACGGTCACTCCGCCATTGCTAGGGATGATAACTGCTCTTGCTTAGCCGTTACCTTCTGCTTTTGGTTCTTCGTTGCGGTGATAATGATAATGGGGGTTTATGGGTCGATGAGTGTGGTTCTAGGTCCATGTTCTTCACTCATCTTGCAACCCAACCCTATGTTTGTGCAATATGTTAAGGTAGAAAACTTAAAGGCAAATCCAGGACTCGTTCTTTATGGTACACATCAAGATCCACCTCTTGATGTTGTTTCCACTTGGAGTGAAACCCATAATATGTCTATTCCTTATGCCTCAGTTAAGCAATGGAAATATTATCTGAATAGAGGGTCTGAAGTAAATATTTCGTATAGCTTGAGCTCTGAGAACTCCTCTCTTTATCTTGTAATTGCAGAAGGAGCTCAAAGCCTCTCACTATGGCTGCAGGACCTAACATATCCCAATACAACTTTGTCTTGGAATGTGATCCGTGGAACTGGTATGATTACACAGAAAATATTCAGGTCATCCAGCTATTATGTGGCATTGGGTAATTTGGAAGAGGAGGTGAAGGTTGAATTAAACCTCACTGTACGGGCCTTCTTGCATAATACAACAAATGCTTACTACAAATGTGCCCTGACTAGTAGTCCATGCAGAATGAATATCTTCTTTCCTGACGGAAACACGGCTGTCTTAGTTTCTCCTGCTCCACAACAGAACACATCCAATGATGAGTGGTATGTCAAACTGACCTATGGACCAAGATGGCTTACATATATTTTTGGAATAGGTGTTCTGACTTTGATTATGTTTTGGGCCTTCAACTTCTTCAACAAGCTTCAATGTTCACATGATGATAGAGTAGGATCTAGATCTGAAGGAACAGGACCTGATCGAGCCCCTTTCCTTTCTCGCAAAGATGATCTTTCAAGGGGTTCATCATATGATTCCTTACCAGAGGATGATGAGGATCTTAACTTTGTCCCCGGAGGTTCCACTGATGGGAAGATATTAGGTGATGGTGAAACCAGTAATAACACCCAGCGTCTTTGTGCGATTTGTTTTGATGCTCCACGAGACTGCTTCTTCCTTCCATGTGGGCACTGTGTGGCTTGTTTTGCATGTGGATCTAGGATAGCCGAGGCAGCAGGTATATGTCCTGTTTGTCGTAGGAACATGAAGAAGGTGAGGAGAATTTTTACTGTTTGA 1317 0.4358 MEEPNSANVGTSQPNENAQVSPNRPRESPSVSIAYRSFARHINGHSAIARDDNCSCLAVTFCFWFFVAVIMIMGVYGSMSVVLGPCSSLILQPNPMFVQYVKVENLKANPGLVLYGTHQDPPLDVVSTWSETHNMSIPYASVKQWKYYLNRGSEVNISYSLSSENSSLYLVIAEGAQSLSLWLQDLTYPNTTLSWNVIRGTGMITQKIFRSSSYYVALGNLEEEVKVELNLTVRAFLHNTTNAYYKCALTSSPCRMNIFFPDGNTAVLVSPAPQQNTSNDEWYVKLTYGPRWLTYIFGIGVLTLIMFWAFNFFNKLQCSHDDRVGSRSEGTGPDRAPFLSRKDDLSRGSSYDSLPEDDEDLNFVPGGSTDGKILGDGETSNNTQRLCAICFDAPRDCFFLPCGHCVACFACGSRIAEAAGICPVCRRNMKKVRRIFTV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01811 438 FunFam E3 ubiquitin-protein ligase APD2 376 437 - -
Mepo3g01811 438 Pfam Domain of unknown function (DUF4792) 111 179 IPR032008 -
Mepo3g01811 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 374 438 IPR013083 -
Mepo3g01811 438 MobiDBLite consensus disorder prediction 336 354 - -
Mepo3g01811 438 MobiDBLite consensus disorder prediction 324 363 - -
Mepo3g01811 438 Pfam Domain of unknown function (DUF4793) 203 308 IPR032010 -
Mepo3g01811 438 MobiDBLite consensus disorder prediction 1 29 - -
Mepo3g01811 438 SMART ring_2 387 425 IPR001841 -
Mepo3g01811 438 ProSiteProfiles Zinc finger RING-type profile. 387 426 IPR001841 -
Mepo3g01811 438 PANTHER OS05G0521000 PROTEIN 43 438 - -
Mepo3g01811 438 SUPERFAMILY RING/U-box 386 432 - -
Mepo3g01811 438 Pfam Zinc finger, C3HC4 type (RING finger) 384 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01811 Mepo-Chr3 26651937 26658568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01811 360 435 C3H Transcription Factor Family AT3G06140 28.947 3.10e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01811 - - tpra:123891971 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01811 3 26651937 26658568 Mepo3g01811 3 26651937 26658568 ECH