Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01807 ATGGGTTCTCGTCAAATTCAACAAGAACAACCATGGCTTTTGGAGAATGGTAACCCAAAAGTCTTGACCAAGGAAGCTAGACATGGACATGGACGGAGCCGGACCGCGCATAACATGTCTTCTCAGTCCTTGCGTAAGAAATCTGATCATACTCTTGTGTCGAGGGTTCGATGTGCTTCGCTTAGGGTCGTGTTGGTTAACATCCAAGAGGTTATTCTTGGTACCAAGCTGTCCATTCTCTTCCCTGCCATTCCTGCTGCCATTGTTGCTCACTACCTTGGCTTAGGAAGACCATGGGTTTTCATACTGAGCTTACTTGGGCTTACACCACTTGCTGAACGTGTGAGCTTTCTCACAGAACAAATTGCCTTCTTCACTGGTCCTACAGTTGGAGGACTTCTTAATGCAACATGTGGGAATATTACTGAGCTGATCATAGCAATATTTGCTCTTAGCAGCAACCAAATTGCTGTTGTCAAGTATTCTCTTTTGGGTTCCATCCTTTCAAACCTTCTTCTTGTGCTTGGAACCTCTCTACTTTGTGGTGGCATTGCTAACCTTGGAGTGGAGCAAAAATATGACAGAAGACAAGCAGATGTGAATTCACTAATGCTGCTATTGGCATTGTTATGTCATTTGCTTCCATTGCTATTCACATTCAGTGCTGCATCACCTGAACTCACAGTAGAACCTTCACTCTACTTGTCAAGATCTGCTAGCATTGTGATGTTGGCTGCATATTTTGCTTACTTGATCTTTCAACTATGGACACATAGGCAATTATTTGAAGCTGAAGATGAAGGTGAAGGTGAGAGCAATGAGGCAGAAGAAGAGGCTGTGATTGGATTTTGGAGTAGCTTTGGTTGGTTGGCTGGAATGACTGTGTTCATTGCTTTGTTATCTGAATATGTGGTTGATACAATTCAGGATGCATCAGATTCATGGGGTTTGTCTGTCAGTTTCCTCAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATTTTTGCTTTCAAGAACAAGCTGGACATTTCCTTAGGTGTTGCATTGGGTTCTGCTACTCAAATTTCAATGTTTGCGGTTCCTCTATGTGTGATTGTTGCATGGATAATGGGTGTGAAAATGGATTTGAACTTCAACCTCCTTGAGACAGGTTCTCTTGCTTTGGCAATTGTAGTCACAGGCTTCACTTTACAGGATGGAACTTCTCACTACATGAAAGGCCTTATTCTCCTACTTTGTTACTTTGTTATTGGTGCTTGCTTCTTTGTGCAAAGAACACCCAATGACCCAAATGGTGTTAATAGCATCACAATTCAATCAGTCACTGATGCAGTTTTAAGTGCCTAA 1368 0.4247 MGSRQIQQEQPWLLENGNPKVLTKEARHGHGRSRTAHNMSSQSLRKKSDHTLVSRVRCASLRVVLVNIQEVILGTKLSILFPAIPAAIVAHYLGLGRPWVFILSLLGLTPLAERVSFLTEQIAFFTGPTVGGLLNATCGNITELIIAIFALSSNQIAVVKYSLLGSILSNLLLVLGTSLLCGGIANLGVEQKYDRRQADVNSLMLLLALLCHLLPLLFTFSAASPELTVEPSLYLSRSASIVMLAAYFAYLIFQLWTHRQLFEAEDEGEGESNEAEEEAVIGFWSSFGWLAGMTVFIALLSEYVVDTIQDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFAVPLCVIVAWIMGVKMDLNFNLLETGSLALAIVVTGFTLQDGTSHYMKGLILLLCYFVIGACFFVQRTPNDPNGVNSITIQSVTDAVLSA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01807 455 Pfam Sodium/calcium exchanger protein 99 256 IPR004837 GO:0016020|GO:0055085
Mepo3g01807 455 Pfam Sodium/calcium exchanger protein 286 424 IPR004837 GO:0016020|GO:0055085
Mepo3g01807 455 NCBIfam calcium/proton exchanger 83 429 IPR004798 GO:0006816|GO:0015369
Mepo3g01807 455 FunFam Vacuolar cation/proton exchanger 128 272 - -
Mepo3g01807 455 NCBIfam calcium/proton exchanger 64 429 - -
Mepo3g01807 455 Gene3D - 279 429 IPR044880 -
Mepo3g01807 455 Gene3D - 128 278 IPR044880 -
Mepo3g01807 455 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 25 433 IPR004713 GO:0006812|GO:0008324|GO:0016020
Mepo3g01807 455 FunFam Vacuolar cation/proton exchanger 274 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01807 Mepo-Chr3 26521681 26525898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01807 10 435 Antiporters AT2G38170 67.981 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01807 K07300 - gmx:100779440 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01807 3 26521681 26525898 Mepo3g01807 3 26521681 26525898 ECH
Mepo3g01807 3 26521681 26525898 Mepo2g00465 2 5562523 5567508 PCT