Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01804 ATGGCAACTTCAACAAGTGAGACCAAGGGAAAGATCATTACTTGCAAAGCCTTTGTGGCAAATGCTCTAGGAGAACCCTTGGTAATGCAACAAATTCTTGTACAACCTCCTCAGAAAATGGAGGTTAGAATCAAGATCCTCTATACTTCCATTTGTCACACCGATCTCAGTGGTTGGAAAGGCGAGTCTGAACCTCAACGTGCTTTTCCTCGGATTTTTGGACATGAAGCTTCCGGGATTGTGGAGAGTGTAGGGGAAGGAGTGAATGACTTAAAAGAAAATGACAAAGTGGTGCTAATATTTAACGGGGAGTGTGGTGAGTGTAACTACTGCAAGTGTGAGAAAACCAACATGTGTGAGAAGTATGGTGTAAACACAATGAAGAGACTAATGTGTGATGGTACAAGCAGATTCTCTACAATAGATGGCAAACTCATTTACCATTTCTTGAACTCTTCAACTTTCACGGAGTATACAGTGGTGGATTCAGGTTGTGCTGTTAAGCTCAACACTGAAGACACCCTTAGCCTCAAAAAACTCACCTTGCTTAGTTGTGGAGTTTCCACAGGAATCGGAGCTGCTTGGAATAATGCTAATGTACATGCTGGTTCTTCTGTAGCAATCTTTGGTTTAGGTGCAATAGGGCTCGCTGTTGCACTAGGGGCACGAGCCAGAGGTGCTTCAAAAATAATAGGTGTGGATGTCAACCCAGAGAAATTAACCATAGCCAAAGCAATGGGAATCACAGACTTCATAAATCCAAGGGATGAAGAGAAGACTGTAGTTGAGAGAATCAGAGAAATGACTGGGGGAGGTGTACACTACAGTTTTGAATGCACAGGAAATGTGAACGTTTTAAGGGATTCCTTCTTGTCTTGTCATGAGGGTTGGGGATTGACTATACTACTGGGAATTCATGCATCACCAAAGTTACTTCCTCTCCACCCAATGGAGCTCTTTGATGGTCGCAAAATCGAAGGATCAGTCTTTGGAGGTTTCAAAGGCAAAAGTCAATTGCCTAATCTTGCCACAGAATGCATGAAAGGGGCAATAAAGTTGGATGATTTCATCACTCACGAACTTCCCTTTGACGAGATAAACAAAGCCTTCGATCTTTTGATTGCCGGGAAGTCACTGAGATGTCTTCTGACACTCTAA 1158 0.4283 MATSTSETKGKIITCKAFVANALGEPLVMQQILVQPPQKMEVRIKILYTSICHTDLSGWKGESEPQRAFPRIFGHEASGIVESVGEGVNDLKENDKVVLIFNGECGECNYCKCEKTNMCEKYGVNTMKRLMCDGTSRFSTIDGKLIYHFLNSSTFTEYTVVDSGCAVKLNTEDTLSLKKLTLLSCGVSTGIGAAWNNANVHAGSSVAIFGLGAIGLAVALGARARGASKIIGVDVNPEKLTIAKAMGITDFINPRDEEKTVVERIREMTGGGVHYSFECTGNVNVLRDSFLSCHEGWGLTILLGIHASPKLLPLHPMELFDGRKIEGSVFGGFKGKSQLPNLATECMKGAIKLDDFITHELPFDEINKAFDLLIAGKSLRCLLTL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01804 385 SUPERFAMILY GroES-like 8 199 IPR011032 -
Mepo3g01804 385 PANTHER ALCOHOL DEHYDROGENASE 10 382 - -
Mepo3g01804 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 175 349 IPR036291 -
Mepo3g01804 385 FunFam S-(hydroxymethyl)glutathione dehydrogenase 190 328 - -
Mepo3g01804 385 Pfam Zinc-binding dehydrogenase 213 332 IPR013149 -
Mepo3g01804 385 SUPERFAMILY GroES-like 335 384 IPR011032 -
Mepo3g01804 385 Pfam Alcohol dehydrogenase GroES-like domain 41 135 IPR013154 -
Mepo3g01804 385 FunFam Alcohol dehydrogenase 6 18 202 - -
Mepo3g01804 385 Gene3D - 190 328 - -
Mepo3g01804 385 Gene3D - 19 381 - -
Mepo3g01804 385 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01804 Mepo-Chr3 26491621 26495143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01804 41 374 Monolignol Biosynthesis Gene Families AT2G21890 27.193 5.78e-11 61.6