Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01803 ATGGCAACTTCAGAAGTTGCAAATGGCAACCACTTAAGTGAGACAAAGGGAAAAACCATTACTTGCAAAGCCGCTGTGGCACATGGTCCAGGACAACCCTTTGTACTTCAACAAGTTCTTGTACAACCTCCTCAGAAAATGGAGGTTAGAATCAAGATCCTTTATACTTCCATTTGTCACACTGATCTCAGTGGTTGGAAGGGAGAGTGTGAGCCTCAACGTGCTTATCCTCGGATTTTTGGCCATGAAGCTTCCGGGATTGTGGAAAGTGTAGGGGAAGGAGTAAGTGACATGAAAGAAAATGACAAGGTGGTGCTTATATTCAATGGTGAGTGTGGTGAGTGTAAATGCTGCATGTGCAAGAAAACCAACATGTGTGAGAAATCTGGAGTAGACCCAATGAAGAAGTTAATGTGTGATAGTACAAGTAGATTTTCTTCAATTGATGGAAAACCCATTTTCCATTTCTTGAACACTTCAACTTTCACTGAGTATACAGTTGTGGATTCAGCTTGTGCTGTTAAGCTCAACACTGAAGATAACCTTAGTCTCAAAAAACTCACCTTGCTTAGTTGTGGAGTTTCCACAGGAATAGGAGCTGCTTGGAATACTGCTAATGTGCATGCTGGTTCATCTGTAGCAGTCTTTGGTTTAGGTGCAGTTGGCCTCGCTGTTGCAGAAGGGGCACGAGCCAGAGGAGCTTCAAAAATAATAGGTGTGGATATTAACCCAGACAAATTCAATATCACAGCCAAAACAATGGGAATCACAGACTTCATAAATCCAAAGGATGAAGAGAAGCCGGTATACGAGATAATCAGAGAAATGACTGATGGAGGTGTAGACTATAGTTTTGAATGTACAGGAAATTTGAACGTTCTAAGAGATAGCTTCTTGTCTGTCCATGAGGGTTGGGGATTGACTGTACTATTGGGAATTCATGGATCACCAAAGTTGCTTCCCATCCACCCAATGGAGCTCTTCGATGGTCGCAGAATCGAAGGTTCAGTGTTTGGAGGTTTCAAAGGCAAAAGTCAATTGCCTAATCTTGCCACAGAATGCATGAAAGGGGCGATAAAGCTGGATAATTTCATCACTCACGAACTTCCCTTTGACGAGATAAACCAAGCCTTCGATCTTTTGATCGCCGGGAAGTCATTGAGATGTATTCTAACACTCTAA 1182 0.4239 MATSEVANGNHLSETKGKTITCKAAVAHGPGQPFVLQQVLVQPPQKMEVRIKILYTSICHTDLSGWKGECEPQRAYPRIFGHEASGIVESVGEGVSDMKENDKVVLIFNGECGECKCCMCKKTNMCEKSGVDPMKKLMCDSTSRFSSIDGKPIFHFLNTSTFTEYTVVDSACAVKLNTEDNLSLKKLTLLSCGVSTGIGAAWNTANVHAGSSVAVFGLGAVGLAVAEGARARGASKIIGVDINPDKFNITAKTMGITDFINPKDEEKPVYEIIREMTDGGVDYSFECTGNLNVLRDSFLSVHEGWGLTVLLGIHGSPKLLPIHPMELFDGRRIEGSVFGGFKGKSQLPNLATECMKGAIKLDNFITHELPFDEINQAFDLLIAGKSLRCILTL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01803 393 Pfam Zinc-binding dehydrogenase 220 340 IPR013149 -
Mepo3g01803 393 SUPERFAMILY GroES-like 343 392 IPR011032 -
Mepo3g01803 393 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 81 95 IPR002328 GO:0008270|GO:0016491
Mepo3g01803 393 Pfam Alcohol dehydrogenase GroES-like domain 48 172 IPR013154 -
Mepo3g01803 393 SUPERFAMILY GroES-like 15 204 IPR011032 -
Mepo3g01803 393 PANTHER ALCOHOL DEHYDROGENASE 17 391 - -
Mepo3g01803 393 FunFam Alcohol dehydrogenase 6 25 209 - -
Mepo3g01803 393 Gene3D - 197 336 - -
Mepo3g01803 393 Gene3D - 26 389 - -
Mepo3g01803 393 FunFam S-(hydroxymethyl)glutathione dehydrogenase 197 336 - -
Mepo3g01803 393 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 182 357 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01803 Mepo-Chr3 26482961 26490874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01803 48 351 Monolignol Biosynthesis Gene Families AT4G37990 26.230 3.49e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01803 K00001 - gmx:100815166 556.984