Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01799 ATGACAAAGGGCAAGGGAACAGCAAAGACTTCAAGGGATGTTTTGAAACCAGTTGATGATCGAAAAGTAGGAAAGAGAAAGGCTGCTGCTAAACCTGAGAAGGTGCCAAAGACTAAGAAGGAGAAGAAGGCCAAGAAAGATCCCAACAAACCAAAAAGACCTCCCAGCGCTTTCTTCGTCTTCCTCGAGGATTTCAGAAAGACTTTCAAGGCAGAGAACCCTAATGTGAAGGCCGTATCAGCTGTTGGAAAGGCTGGAGGAGAGAAATGGAAATCTTTGACTAAGGCTGAAAAAGCTCCATATGAAGCCAAGGCTGCAAAAAGGAAAGTTGAGTATGAAAAGCTTATGAATGCTTATAATAACAAGCCAAGTTCAGCGGACGATGAGGAGGAGGAATCAGACAAGGACAAATCTGAAGTTAATAATGAAGATGAAGCAAGTGGAGAGGATGACCACCAAGATGACGAGGAAGAGGATGACGAGGACGAAGATGACGATGACGATGAAGACGATGAATGA 519 0.4393 MTKGKGTAKTSRDVLKPVDDRKVGKRKAAAKPEKVPKTKKEKKAKKDPNKPKRPPSAFFVFLEDFRKTFKAENPNVKAVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKVEYEKLMNAYNNKPSSADDEEEESDKDKSEVNNEDEASGEDDHQDDEEEDDEDEDDDDDEDDE 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01799 172 MobiDBLite consensus disorder prediction 117 172 - -
Mepo3g01799 172 MobiDBLite consensus disorder prediction 9 52 - -
Mepo3g01799 172 Pfam HMG (high mobility group) box 51 120 IPR009071 -
Mepo3g01799 172 MobiDBLite consensus disorder prediction 83 105 - -
Mepo3g01799 172 MobiDBLite consensus disorder prediction 1 56 - -
Mepo3g01799 172 SUPERFAMILY HMG-box 42 125 IPR036910 -
Mepo3g01799 172 CDD HMG-box_AtHMGB1-like 52 112 - -
Mepo3g01799 172 MobiDBLite consensus disorder prediction 127 172 - -
Mepo3g01799 172 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 2 155 IPR031061 -
Mepo3g01799 172 SMART hmgende2 50 121 IPR009071 -
Mepo3g01799 172 MobiDBLite consensus disorder prediction 90 105 - -
Mepo3g01799 172 Gene3D High mobility group box domain 34 138 IPR036910 -
Mepo3g01799 172 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 51 120 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01799 Mepo-Chr3 26450756 26454272 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mepo3g01799 HMG_box 2.7e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01799 K25507 - gmx:100499704 190.274