Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01794 ATGATTTGCAATTGTTTTGGTGCCTTGAATTGGAGTAAAGGGAAGGGTGAACCTGCTGAGCAGCCACATGAACAAGTGATGAAAACTAAAAGCTTTAGCTATAACTCATTGAGATCTGCTACTGGAGATTTTCATCCTTCATGCAAAATTGGTGGAGGAGGTTATGGAGTTGTCTACAAGGGTGTTTTAAGGGATGGTACTCAAGCTGCTATCAAGTCTCTTTCTGTAGAGTCTAAACAAGGAACTCATGAATTTATGACAGAAATTGCTATGATATCTAATATACAACATCCAAATCTTGTGAAACTAATCGGCTTCTGTATCGAGGGTAATCATCGAATATTGGTGTACGAGTTTCTTGAGAATAATAGCCTCGCAAGTTCTTTGCTAGGTTCAAAAAGTAAATGTGTTCCTCTGGATTGGCAAAAGAGGGCTACTATTTGCCGTGGTACAGCTTCAGGTCTAAGCTTTCTTCATGAAGAGGCTCAGCCAAACATTGTTCACAGAGATATCAAAGCCAGCAACATATTGTTGGATGAGAACTTCAATCCAAGAATTGGTGATTTTGGTCTTGCAAAACTTTTTCCTGACAATGTCACACATGTTAGTACTCGAGTTGCCGGAACAATGGGATATCTTGCGCCAGAATATGCGCTTCTAAGACAGCTTACAAAGAAAGCCGATGTATATAGTTTTGGGATTCTGATGCTTGAAATAATCAGTGGTAAAAGTAGTAGCAAAGCTGCATTTGGAGACAATATTTTGGTTCTGGTGGAATGGGCATGGAAGCTTAAAGAAGAAAACCGGCTTCTGGAACTTGTTGATTCAGAACTAACCGACTATGATGAAAACGAGGTGTATCGGTTCCTTGTGATTGCTCTATTTTGCACCCAATCAGGAGCTCAGCACAGACCAACCATGAAACAAGTTCTACAAATGCTTTCCAGACAAGTTCATCTTAATGAGAAGGCATTGACTGAGCCTGGAATATACAGATGGAATGCCTCCGCAAAGACGAGTGGTTCTTTGAATGAGATGTCATCGTCATCTCAAGTAATCAAGCACAAAAAATATGAAAATCGATGTCAAACCTCTACGCAATTTAGCGGTACGGATATTGTGACAGAGATGTTTCCTAGATGA 1143 0.4007 MICNCFGALNWSKGKGEPAEQPHEQVMKTKSFSYNSLRSATGDFHPSCKIGGGGYGVVYKGVLRDGTQAAIKSLSVESKQGTHEFMTEIAMISNIQHPNLVKLIGFCIEGNHRILVYEFLENNSLASSLLGSKSKCVPLDWQKRATICRGTASGLSFLHEEAQPNIVHRDIKASNILLDENFNPRIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLRQLTKKADVYSFGILMLEIISGKSSSKAAFGDNILVLVEWAWKLKEENRLLELVDSELTDYDENEVYRFLVIALFCTQSGAQHRPTMKQVLQMLSRQVHLNEKALTEPGIYRWNASAKTSGSLNEMSSSSQVIKHKKYENRCQTSTQFSGTDIVTEMFPR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01794 380 SMART serkin_6 44 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01794 380 SUPERFAMILY Protein kinase-like (PK-like) 22 314 IPR011009 -
Mepo3g01794 380 FunFam cold-responsive protein kinase 1 15 119 - -
Mepo3g01794 380 CDD STKc_IRAK 63 316 - -
Mepo3g01794 380 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 28 348 - -
Mepo3g01794 380 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Mepo3g01794 380 Gene3D Phosphorylase Kinase; domain 1 10 119 - -
Mepo3g01794 380 FunFam Putative LRR receptor-like serine/threonine-protein kinase 120 326 - -
Mepo3g01794 380 Coils Coil 264 284 - -
Mepo3g01794 380 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01794 380 Pfam Protein kinase domain 47 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01794 380 Gene3D Transferase(Phosphotransferase) domain 1 120 329 - -
Mepo3g01794 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01794 Mepo-Chr3 26370406 26373955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01794 27 329 Receptor kinase-like Gene Family AT1G56120 52.475 8.99e-104 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g01794 Pkinase 9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01794 - - gmx:100785766 595.89