Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01782 ATGAGCAATTCATGTGTGATCTTCTCCAAGAAGATATTATTCCAATTCCTTTGTGGTTTTCTTTTACACATTAGCAAATATCACTACTCTTCAACTGCATCAACCTTACAAGGAAATGAAACTGATTTACATGCTTTACTTGACTTCAAGAATAGAATAACTCAAGATCCATTTGAAACCCTAAGTTTATGGAATGATTCAATCCACCACTGCAACTGGTTAGGAATCACCTGTAACATCTCCAATGGAAGAGTCATGCATTTGATCCTTGCAGATATGACACTAGCTGGAACACTCCCACCATCAATAGGAAATCTTACATACCTTACAAAACTCAACCTTAGAAATAATAGTTTTCATGGAGTGTTTCCTCAACAAGTTGGAAATTTACTATATCTTCAACATCTAAATATTAGTTATAATTCTTTTGGTGGTAGCATACCAAGTAATCTAAGTCAGTGCATAGAGCTAAGTATATTATCTTCTGGTCATAACAATTTCACAGGAACAATTCCAACATGGATAGGAAATTTTTCTTCTTTATCTCTACTTAATCTTGCTGTGAACAATTTGCATGGAACCATACCAAATGAGGTAGGAAAGTTATCAAGGCTAACACTTTTTGCACTAAATGGAAATCACTTGTATGGAAAAATTCCTACTTCAGTTTTTAATATTTCTTCCTTATCCTTTTTAACCTTTTCTCAAAATAATTTGCATGGTAACTTACCTTCTGATGTTGGTTTTACTCTTCCAAATCTTGAAACATTTGCCGGTGGAGTCAATGATTTCACTGGAACAATACCTGAGTCATTATCAAATGCTTCAAGATTGGAAATTTTAGATTTTGCTGAAAATAATCTCATTGGAACACTTCCTAAGAACATAGGAAGATTGACCCTTTTGAAAAGACTGAATTTTGATACCAATAGACTTGGATATGGTGAAGATGGTGACCTGAATTTTCTTACTTCCTTGATTAATTGTACTTCTCTTGAAGTTTTAGGTCTTGCTGAAAATAGTTTTGGAGGAGAATTGCCTAGCTCTATTGCTAATCTTTCCACCAATTTGAACCAACTTGATTTAGGTGAAAATGCTATATATGGAAGTATCCCTATTGGAATAAGTAACCTAGTTAACTTGACCGGTTTGGGAATGGAAAAGAACAACCTAAGTGGTTTTGTTCCTGATACAATAGGTATGCTTCAAAAGCTGGTTGATTTAGAATTGTATAGCAACAAATTTTCTGGTGTGATTCCTTCCTCCATTGGAAACTTGACTAGATTAACAAAGCTACTCATAGACGATAACAATTTCGAGGGAAGTATACCAACAAGTCTTGAAAATTGTAAACGCTTGTTGATGCTAAATTTGAGTCATAACATGCTCAATGGTTCCATACCAAGACAAGCATTTTCGTTGTCTTCTCTTTCAATATACTTAGACTTATCTCATAATTCTCTCACAGGGTCCTTGCCCTTCGAAATAGGTAAGCTAGTTAATCTTGCAAATTTGGATCTATCAAAGAACAAATTGTCCGGCATGATTCCGTCCTCACTTGGAAGCTGTGCTAGTTTGGAATGGCTGCATATGCAAGGTAACTTTTTTGAAGGAACCATTCCTTCAACTCTACAAAATTTGAGAGGTATACAGCATATTGATCTTTCATGGAATAACTTATCTGGCAAGATTCCTGAATTTCTTGGTGAGATTAAAGGGCTAATGCAACTAAATCTTTCTTACAATGACTTGGATGGAGAATTACCGATGAACGGAATCTTCAAAAATGCAACTTCCTTTTCAATCAATGGAAACATCAAGCTTTGTGGTGGTGTTTCAGAATTAAATTTACCTGCATGCACTGTCAAAAAAGCAAAATTTCATAGATTAAAGGTGATTATTGCTATAGCTAGTGCACTTGTTTTTCTACTCTTTATCTCTTGTTTTCTAATAATCATCGTGATAAAAAGATCAAGAAAGAAAGCTTCAAGAGAAACTACTACTATAAAGGATTTGGAGCTGAACATTTCTTACTCAGAAATTGTGAAGTGTACCGGTGGATTCTCCGACAATAACTTGATTGGCTCAGGAAGTTTTGGTTCTGTGTACAAAGGAACTCTTTCAAGTGATGGAACAACTATTGCAATTAAAGTGTTGAACCTTGAACAGCGAGGAGCTTCAAAAAGCTTCATTGATGAATGCAATGCTTTGAAAGTTATAAGGCACCGCAACCTTCTGAAGATCATAACTGCTATCTCAAGTGTCGATCATCAAGGTAAGGACTTCAAAGCACTTGTGTATGAGTTCATGTCCAATGGAAGTCTAGAAGATTGGTTGCATCCTATAAATCAGAAGAAGACACTAACATTTGTACAAAGACTTAACATAGCAATTGATGTTGCTTGTGCACTTGAATATCTTCACCACTTTTGTGAAACTCCAATTGTTCATTGTGACATAAAGCCAAGCAATGTACTACTTGACAATGATATGGTAGCACATGTTGGTGACTTTGGTTTAGCTACATTTCCGTTTGAAGAATCATGTGATTCTCCCAAACATTCAACTATGTCAGCTAGCCTAAAGGGTTCTATAGGGTACATCCCTCCAGAGTATGGAATGGGTGGACACCCTTCTGCACTTGGAGATGTTTACAGTTATGGGATACTATTGCTAGAGATTTTCACAGGAAAAAGACCAATAAATGAGATGTTTGAAGGTGGCATGGGAATTCAACAGTTTACAGCCTTGGCTTTACCAAATCATGCCATAAATATAATTGATCCTTCATTGCTCTATTATCAAGAATTTGATGGAAAAGATGATGATTACAGTGAAGAGATAGCATTAAGGAGAGAGAAGGAACCTGGAGACTTATCTACTATGGAGAATTGTTTGGTTTCTGTGTTGCAAATTGGAGTGTCATGCTCTTCAACTTCACCAACTGAACGAATACCTATGACTTTGGTTGTCAACAAACTGCATGCAATCAAGAACTCATTTAAGACTTAA 3012 0.3569 MSNSCVIFSKKILFQFLCGFLLHISKYHYSSTASTLQGNETDLHALLDFKNRITQDPFETLSLWNDSIHHCNWLGITCNISNGRVMHLILADMTLAGTLPPSIGNLTYLTKLNLRNNSFHGVFPQQVGNLLYLQHLNISYNSFGGSIPSNLSQCIELSILSSGHNNFTGTIPTWIGNFSSLSLLNLAVNNLHGTIPNEVGKLSRLTLFALNGNHLYGKIPTSVFNISSLSFLTFSQNNLHGNLPSDVGFTLPNLETFAGGVNDFTGTIPESLSNASRLEILDFAENNLIGTLPKNIGRLTLLKRLNFDTNRLGYGEDGDLNFLTSLINCTSLEVLGLAENSFGGELPSSIANLSTNLNQLDLGENAIYGSIPIGISNLVNLTGLGMEKNNLSGFVPDTIGMLQKLVDLELYSNKFSGVIPSSIGNLTRLTKLLIDDNNFEGSIPTSLENCKRLLMLNLSHNMLNGSIPRQAFSLSSLSIYLDLSHNSLTGSLPFEIGKLVNLANLDLSKNKLSGMIPSSLGSCASLEWLHMQGNFFEGTIPSTLQNLRGIQHIDLSWNNLSGKIPEFLGEIKGLMQLNLSYNDLDGELPMNGIFKNATSFSINGNIKLCGGVSELNLPACTVKKAKFHRLKVIIAIASALVFLLFISCFLIIIVIKRSRKKASRETTTIKDLELNISYSEIVKCTGGFSDNNLIGSGSFGSVYKGTLSSDGTTIAIKVLNLEQRGASKSFIDECNALKVIRHRNLLKIITAISSVDHQGKDFKALVYEFMSNGSLEDWLHPINQKKTLTFVQRLNIAIDVACALEYLHHFCETPIVHCDIKPSNVLLDNDMVAHVGDFGLATFPFEESCDSPKHSTMSASLKGSIGYIPPEYGMGGHPSALGDVYSYGILLLEIFTGKRPINEMFEGGMGIQQFTALALPNHAINIIDPSLLYYQEFDGKDDDYSEEIALRREKEPGDLSTMENCLVSVLQIGVSCSSTSPTERIPMTLVVNKLHAIKNSFKT 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01782 1003 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Mepo3g01782 1003 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Mepo3g01782 1003 FunFam LRR receptor-like serine/threonine-protein kinase EFR 659 769 - -
Mepo3g01782 1003 FunFam Leucine-rich repeat receptor protein kinase EMS1 219 316 - -
Mepo3g01782 1003 SUPERFAMILY L domain-like 355 610 - -
Mepo3g01782 1003 SUPERFAMILY RNI-like 89 416 - -
Mepo3g01782 1003 Gene3D Ribonuclease Inhibitor 248 321 IPR032675 -
Mepo3g01782 1003 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 770 1003 - -
Mepo3g01782 1003 SMART serkin_6 688 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01782 1003 Pfam Protein kinase domain 689 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01782 1003 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 326 995 - -
Mepo3g01782 1003 Gene3D Transferase(Phosphotransferase) domain 1 770 1003 - -
Mepo3g01782 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Mepo3g01782 1003 FunFam LRR receptor-like serine/threonine-protein kinase EFR 318 626 - -
Mepo3g01782 1003 ProSiteProfiles Protein kinase domain profile. 688 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01782 1003 FunFam Leucine-rich repeat receptor-like protein kinase 39 197 - -
Mepo3g01782 1003 SUPERFAMILY Protein kinase-like (PK-like) 668 994 IPR011009 -
Mepo3g01782 1003 Gene3D Ribonuclease Inhibitor 322 628 IPR032675 -
Mepo3g01782 1003 Gene3D Ribonuclease Inhibitor 41 153 IPR032675 -
Mepo3g01782 1003 Pfam Leucine rich repeat 525 584 IPR001611 GO:0005515
Mepo3g01782 1003 Pfam Leucine rich repeat 428 488 IPR001611 GO:0005515
Mepo3g01782 1003 Gene3D Phosphorylase Kinase; domain 1 650 769 - -
Mepo3g01782 1003 Gene3D Ribonuclease Inhibitor 154 247 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01782 Mepo-Chr3 26232168 26235943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01782 39 1001 Receptor kinase-like Gene Family AT3G47570 45.563 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo3g01782 Pkinase 6.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01782 - - gmx:100785230 1493.4