Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01754 ATGACGATTTCTATGGACTTGAATGCCTCTCCTTTGCCGGAGGAAGATGAAGATCCTTTTGAGGGCCAGGTTGAAGAGTATAATCCGCCAAAAAAGGACCAGGTCGAAGAGTATATTGCACCAGAAGAGCACATAGAAAGTGGAGCTGATATAGCTCGCCGGGAACGTGAAGAAAGAAAGAAACGGTTGAAAAGAGAACGTCCAGATGACAGGCCCGTGCAAGTATCACAGCCACCTGGATATGATAATTTTTTCCATAATAAGATCCTTAAATCATATGATAGAAGTAAGCTTCCTCCGGGTTGGTTGGATTGCCCTTTGTCTGGCCAGGAAATTTTTGGCATGATACCTTCTAAGGTTCCATTGGGTGAATCCTTCAATGACTATATTTTACCTGGTAAAAGATACTCATTTAAGCAAGTGATACATCAACTGCGACTTTTAGGGAGAAAACTTGGTCTGGTCATTGATCTGACAAATACTTCTCGATACTATCCAGTATCAGATCTAAAGAAAGAGGGTATCAAGCATGTTAAGATCCAATGCAAGGGCCGCGGTTCAGTACCTGATAATTCATCTGTTAATCATTTTGTGAACGAGGTTATGCAATTTTTATCGCGTCAAAAACACTCGAAGAAGTATATACTTGTTCATTGTACACATGGTCACAATCGTACAGGATATATGATTGTCCATTATCTAATGCGCACAATGTCAATGTCTGTTACTCAGGCGATCAAAATATTTTCTGATGCACGTCCTCCAGGAATCTATAAACCTGAGTATATTGATTCATTATATAAATTCTATCATGAAAAAAAGCCTGAAACAATAGTCTGTCCTGCTACTCCGGAGTGGAAGAGGGCTCCTGAACTTGTTGATCTCAATGGTGAAGCAGCTCCAGATAATGATGATGATGATGATGATGATGATGATGGAGTAGCAGGTCCAACATTGCAAGAGAACCATGAGATTGACACAATAATGACAAACGATGATGTTTTGGGAGATGAGATACCTAATGATCAGCAAGATGCATTTCGGCAGTTCTGCTTTCAGATACTCAAATTGGGGGCTGGGACCAGAGGACACATGCAATTTCCAGGGTCACACCCAGTTTCTTTAAACAGGGAAAATTTACAGCTGCTACGCCAGCGTTACTACTATGCAACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGATGGATGCTTCTTGATTGATAGAAACTTCAATTTTAGAAGGATTCAAATGAGGTTTCCATGCAGGGTTGCAAATGATGGCTTGGCAGAGAAGACTCACCACTTCACTTTACTTGATGGGGAGATGATTATTGATACAGTGCCAAATTCAAAAAAGCAGGAAAGGAGATACCTAATATATGATCTGATGGCAGTCAACTTCGTTTCTGTGATAGAGCGGCCTTTCTGTGAGCGATGGAAGATGCTTGAGAAAGAAGTGATTGAACCCAGGAATCATGAACGGTACCATCGCAAACATCCTTACTATATATATGACATGGAGCTTTTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTGCTGTGACAAAACTTTTGAATGAATTCATTCCAAAACTCTCACACGATGCAGATGGTCTCATATTTCAGGGATGGGACGATCCTTATGTACCTCGTACTCATGAAGGTCTCTTAAAGTGGAAATATGCTGCTCTGAATTCAGTTGATTTTCTCTATGAGATTGTTGATGATCGCCGGCTACTTTTTCTCTATGAACGTGGAAAAAAGAAACTCATGGAAGGGTTTATTGTTGCATTCGAAGAAGGTTCAGACCCCATGCTTTATTCTGGAAAGATCATAGAGTGTGCTTGGGATGGTGATAGAAACGAATGGATATTCAAGCGAGTCAGAACAGATAAGTCAACTCCCAATGACTTAAATACTTACAAGAAGGTGATGCGAAGCATAAAAGACAATATCACCGAGGATGTCCTGTTGACTGAAATAAACGAGATAATCCGCCTTCCCATGTATGCCGACAGGATAAGAATCGATAGCAAAGGACATCATGTAGCTAGGCGAAAGTAG 2082 0.4068 MTISMDLNASPLPEEDEDPFEGQVEEYNPPKKDQVEEYIAPEEHIESGADIARREREERKKRLKRERPDDRPVQVSQPPGYDNFFHNKILKSYDRSKLPPGWLDCPLSGQEIFGMIPSKVPLGESFNDYILPGKRYSFKQVIHQLRLLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRGSVPDNSSVNHFVNEVMQFLSRQKHSKKYILVHCTHGHNRTGYMIVHYLMRTMSMSVTQAIKIFSDARPPGIYKPEYIDSLYKFYHEKKPETIVCPATPEWKRAPELVDLNGEAAPDNDDDDDDDDDGVAGPTLQENHEIDTIMTNDDVLGDEIPNDQQDAFRQFCFQILKLGAGTRGHMQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCFLIDRNFNFRRIQMRFPCRVANDGLAEKTHHFTLLDGEMIIDTVPNSKKQERRYLIYDLMAVNFVSVIERPFCERWKMLEKEVIEPRNHERYHRKHPYYIYDMELFRVRRKDFWLLSAVTKLLNEFIPKLSHDADGLIFQGWDDPYVPRTHEGLLKWKYAALNSVDFLYEIVDDRRLLFLYERGKKKLMEGFIVAFEEGSDPMLYSGKIIECAWDGDRNEWIFKRVRTDKSTPNDLNTYKKVMRSIKDNITEDVLLTEINEIIRLPMYADRIRIDSKGHHVARRK 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01754 693 MobiDBLite consensus disorder prediction 296 321 - -
Mepo3g01754 693 CDD RNA_5'-triphosphatase 101 268 - -
Mepo3g01754 693 PANTHER MRNA-CAPPING ENZYME 93 678 - -
Mepo3g01754 693 SUPERFAMILY Nucleic acid-binding proteins 570 680 IPR012340 -
Mepo3g01754 693 PIRSF mRNA_capping_HCE 84 693 IPR017074 GO:0004484|GO:0006370|GO:0140818
Mepo3g01754 693 Pfam mRNA capping enzyme, C-terminal domain 571 664 IPR013846 -
Mepo3g01754 693 Gene3D - 605 673 IPR012340 -
Mepo3g01754 693 CDD Adenylation_mRNA_capping 342 567 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mepo3g01754 693 FunFam mRNA capping enzyme, putative 330 564 - -
Mepo3g01754 693 MobiDBLite consensus disorder prediction 298 315 - -
Mepo3g01754 693 ProSiteProfiles Dual specificity protein phosphatase domain profile. 125 276 IPR020422 GO:0006470|GO:0008138
Mepo3g01754 693 ProSiteProfiles ATP-dependent DNA ligase family profile. 453 594 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Mepo3g01754 693 Gene3D Protein tyrosine phosphatase superfamily 94 313 IPR029021 -
Mepo3g01754 693 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 195 264 IPR000387 GO:0016311|GO:0016791
Mepo3g01754 693 MobiDBLite consensus disorder prediction 24 72 - -
Mepo3g01754 693 Pfam Dual specificity phosphatase, catalytic domain 151 270 IPR000340 GO:0008138|GO:0016311
Mepo3g01754 693 FunFam mRNA capping enzyme family protein 94 311 - -
Mepo3g01754 693 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 97 286 IPR029021 -
Mepo3g01754 693 Gene3D DNA ligase/mRNA capping enzyme 330 566 - -
Mepo3g01754 693 Pfam mRNA capping enzyme, catalytic domain 371 566 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mepo3g01754 693 FunFam mRNA-capping enzyme 588 681 - -
Mepo3g01754 693 MobiDBLite consensus disorder prediction 1 80 - -
Mepo3g01754 693 SMART dsp_5 132 272 IPR020422 GO:0006470|GO:0008138
Mepo3g01754 693 ProSitePatterns Tyrosine specific protein phosphatases active site. 217 227 IPR016130 GO:0016311|GO:0016791
Mepo3g01754 693 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 331 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01754 Mepo-Chr3 25868478 25879073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01754 1 693 Protein tyrosine phosphatase (PTP) family AT3G09100 67.145 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01754 K13917 - gmx:100803597 1160.59