Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01748 ATGCTTCAGATTCGGCTTAGTAAGAATCCATCCTCTGATGGGTCGGCAGGCGTGAAGCAATCGCCTGTTGAGACTGTTACGGTTGCCTGCCCTGACCATTTGGTCCTTGCTGATCTTCCTGTTGCAAAGGGTATTGGTACAGCTACTGCTTCTTCCGTTGTTAGGAATGTGGGTCGCAGATCCCGTCGTCAGCTTGGTGAGCGAGTTCATTTCTGTGTTCGATGTGATTTTCCGATTGCGATTTATGGAAGGCTGAGCCCTTGTGACCATGCTTTCTGTCTTGATTGTGCTAGAAGTGATTCATCGTGCTACCTGTGTGAAGGACGAATCCAGAAGATTCAGACTATCAAAGTGATGGAAGGAATCCTAATATGTGCAGCTCCTCATTGTCTTAAGTCATTCTTGAAGAGAGTTGATTTTGAATCTCATATCCATGAATACCACGCCGATCTTCTTCGCCCCAATGCAGATAAAGAAGACGGAAATGAGTCAGAAGCACAAAGTGTTAGACAACCTACAGCCTCAGACTCCACTGCTCGAGGCCCCCAAAGGCAAGTTTTTTCTCCAGGTTCAAATTCTCAACATCATGATCTGGAAGACAGAACCCGTCGGCAACCACCAAGAGATCAAGCTCCTTCAAGGCCAGCAATGCAGCAAAAGCCACCATTTTTCGGCCAACAACATCACCCTTCAGATTCCATGTCTGGTTCTGTCGGAGGTATGCAGCAGGGCTTTCATCAACAAAGTTTCGACATGCAGCAGCACCCCCCACAAGAACCTGTTCAGTTTACCGACAGGCAGCAATCAGTTGGTCCAGATAACTCATTTCCTGAGTATCCAACAATGCACCCTGCACAAGCCACCAATGTTCCCCCACACCCAAACCCAATGCTGAACCCACCTGTGCCATTTGGTTATCCCCCTTTCCCGCAAGACCGAGCTCAACCATTTTATGCTGCTCCCTATGATATGCCTAGGCAGGACTCGTCTTCTGATATTGGTGGAGACCCAAATTCATTAATTGGTTACCCACAAGGTGTCCCAAATGGCACAAATTTTCAAGGAAATTACCCCCAGCCCTGGAATGCAGCAGGTGTTCCTTTTGAACAAGCACAAGGTGGTGGTATGGCTGTGGATCCAAGGGATTCCAAAGGTATATTGGCACCACAGCCCATGCCTCTCCCACCACCACCACCACCTCCGGCCCACATGTTGAAACCAAACTACTATCCTGGTGATCATGGACATGATGGTCAAGGTTATGGTTGGCAGCATGATAACCGTGACAACTTTAATGGTCAAGGCTGA 1308 0.4824 MLQIRLSKNPSSDGSAGVKQSPVETVTVACPDHLVLADLPVAKGIGTATASSVVRNVGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCDHAFCLDCARSDSSCYLCEGRIQKIQTIKVMEGILICAAPHCLKSFLKRVDFESHIHEYHADLLRPNADKEDGNESEAQSVRQPTASDSTARGPQRQVFSPGSNSQHHDLEDRTRRQPPRDQAPSRPAMQQKPPFFGQQHHPSDSMSGSVGGMQQGFHQQSFDMQQHPPQEPVQFTDRQQSVGPDNSFPEYPTMHPAQATNVPPHPNPMLNPPVPFGYPPFPQDRAQPFYAAPYDMPRQDSSSDIGGDPNSLIGYPQGVPNGTNFQGNYPQPWNAAGVPFEQAQGGGMAVDPRDSKGILAPQPMPLPPPPPPPAHMLKPNYYPGDHGHDGQGYGWQHDNRDNFNGQG 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01748 435 MobiDBLite consensus disorder prediction 194 208 - -
Mepo3g01748 435 MobiDBLite consensus disorder prediction 152 273 - -
Mepo3g01748 435 MobiDBLite consensus disorder prediction 1 20 - -
Mepo3g01748 435 CDD RING-HC_HAKAI-like 70 119 IPR040380 -
Mepo3g01748 435 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Mepo3g01748 435 MobiDBLite consensus disorder prediction 371 435 - -
Mepo3g01748 435 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 425 IPR040383 GO:0016567|GO:0061630
Mepo3g01748 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 120 IPR013083 -
Mepo3g01748 435 MobiDBLite consensus disorder prediction 166 193 - -
Mepo3g01748 435 ProSitePatterns Zinc finger C2H2 type domain signature. 125 148 IPR013087 -
Mepo3g01748 435 MobiDBLite consensus disorder prediction 224 273 - -
Mepo3g01748 435 MobiDBLite consensus disorder prediction 389 406 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01748 1 431 C2H2 Transcription Factor Family AT5G01160 45.393 2.83e-106 317