Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01680 ATGGCTACAAATCAAGAAGAAGTGAAGCTATTGGGAGCTATAGGAAGCCCATTTGTGTGCAGGGTACAGATTGCTCTCAAGTTTAAGGGAATTGAATACAAATTTCTTGAAGAAAACATGGCCAACAAAAGTGAACTTCTTCTCAAGTATAACCCAGTTTATAAAAAGATTCCAGTTTTTGTTCACAATGATAAGCCTATATCAGAATCCCTTGTGATTATTGAGTATATCGATGAAACTTGGAAACAAAATCCCATCTTGCCTTCTGATCCATACCAAAGAGCCCTTGCTCGATTTTGGTCCAACTTCATCGACGACAAGATTGTGTCCGCGTCATCCAAATCCGTTTTTACGCTTGATGAGAAAGAGCGCGAGAAGAATGTTGAAGAAACAACTGAGGCTCTTCAGTTTCTTCAGAATGAGCTGAAGGGTAAGTACTTTGGAGGAGAAGAGTTTAATTTTGTGGATATTGCTGCTGTTTTCGTAGCATTCTGGATCCCTCTAGTTCAAGATATAATAGGGTTGCAATTGTTCACTGCTGAAAAGTTTCCAAAGCTTTACAATTGGAGTCAAGAATTTCTTGACCATCCTATTGTGAAGGAAACTCTTCCTCCAAGAGAGCCTCTTTTCGCCTTTTTTAAAGGTCGTTATGAGAGCCTTCTTGCTGCTTCAGAATAG 678 0.3938 MATNQEEVKLLGAIGSPFVCRVQIALKFKGIEYKFLEENMANKSELLLKYNPVYKKIPVFVHNDKPISESLVIIEYIDETWKQNPILPSDPYQRALARFWSNFIDDKIVSASSKSVFTLDEKEREKNVEETTEALQFLQNELKGKYFGGEEFNFVDIAAVFVAFWIPLVQDIIGLQLFTAEKFPKLYNWSQEFLDHPIVKETLPPREPLFAFFKGRYESLLAASE 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01680 225 FunFam Tau class glutathione S-transferase 87 223 - -
Mepo3g01680 225 Coils Coil 121 141 - -
Mepo3g01680 225 CDD GST_N_Tau 8 81 - -
Mepo3g01680 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Mepo3g01680 225 SFLD Main.3: Omega- and Tau-like 4 223 IPR045073 -
Mepo3g01680 225 Gene3D - 90 224 - -
Mepo3g01680 225 SFLD Glutathione Transferase (cytosolic) 4 223 IPR040079 -
Mepo3g01680 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 207 IPR045073 -
Mepo3g01680 225 FunFam Glutathione S-transferase GSTU6 3 87 - -
Mepo3g01680 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Mepo3g01680 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Mepo3g01680 225 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Mepo3g01680 225 Gene3D Glutaredoxin 1 89 - -
Mepo3g01680 225 Pfam Glutathione S-transferase, C-terminal domain 101 197 IPR004046 -
Mepo3g01680 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Mepo3g01680 225 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01680 Mepo-Chr3 24990704 25006688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01680 3 220 Glutathione S-transferase Gene Family AT2G29420 50.228 5.65e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01680 K00799 - gmx:100806714 383.259