Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo3g01677 | ATGGCATCAAATCAGGAAGAGGTGAAGCTTTTTAAACTTGTGGGAAGTCCATTTTCAACCAGGGTTGAAATTGCTCTAAAGTTGAAGGGTGTTGAATACAAATTTGAGGAAGAAAAGGTTGGGAACTTGAGTGATACAGTCATCAAATACAATCCTGTTTATAAGAAAGTTCCTGTATTAGTTCATAATGGCAAGCCTATATCAGAGTCACTTGTGATTCTTGAATATATTGATGAGACTTGGAAACAAAACCCTATCTTGCCTTCTGATCCTTACAAAAGAGCCTTGGCTCGTTTCTGGTCCAAGTTTATAGATGATAAGTGTATGATTCCTGCATGGAAAACTGCTTTCACTCTTGATGAGAAAGAACGTGAGAAGAGTTTTGAGGAAACAGAAGAGGCTTTTCAATTTCTTGAGAATGAGCTCAAGGACAAGTTCTTTAGTGGAGATGAGATTGGACTTATTGACATTACTGCGGTATTTATAGCTTTTTGGTTCCCTATTGTACAAGAAGTAACAGGATTGAAGTTATTCACAAGTGAGAAATTTCCTAAGCTTTACAATTGGAGTCAAGAATTCAACAACCATCCAATTATCAAGGAAAATCTTCCTTCTAAAGAAGGACTTTTGGCCTTCTTCAAAGCTCGTTATGAAAGTCTTGTTGCTTCAAAATAG | 675 | 0.3659 | MASNQEEVKLFKLVGSPFSTRVEIALKLKGVEYKFEEEKVGNLSDTVIKYNPVYKKVPVLVHNGKPISESLVILEYIDETWKQNPILPSDPYKRALARFWSKFIDDKCMIPAWKTAFTLDEKEREKSFEETEEAFQFLENELKDKFFSGDEIGLIDITAVFIAFWFPIVQEVTGLKLFTSEKFPKLYNWSQEFNNHPIIKENLPSKEGLLAFFKARYESLVASK | 224 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo3g01677 | 224 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 6 | 85 | IPR004045 | - | |
| Mepo3g01677 | 224 | Pfam | Glutathione S-transferase, C-terminal domain | 118 | 197 | IPR004046 | - | |
| Mepo3g01677 | 224 | CDD | GST_N_Tau | 8 | 81 | - | - | |
| Mepo3g01677 | 224 | FunFam | Tau class glutathione S-transferase | 1 | 89 | - | - | |
| Mepo3g01677 | 224 | FunFam | Tau class glutathione S-transferase | 87 | 223 | - | - | |
| Mepo3g01677 | 224 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 12 | 206 | IPR045073 | - | |
| Mepo3g01677 | 224 | SUPERFAMILY | GST C-terminal domain-like | 79 | 218 | IPR036282 | - | |
| Mepo3g01677 | 224 | Pfam | Glutathione S-transferase, N-terminal domain | 7 | 79 | IPR004045 | - | |
| Mepo3g01677 | 224 | SFLD | Main.3: Omega- and Tau-like | 4 | 222 | IPR045073 | - | |
| Mepo3g01677 | 224 | CDD | GST_C_Tau | 91 | 216 | IPR045074 | GO:0004364|GO:0006749 | |
| Mepo3g01677 | 224 | Gene3D | Glutaredoxin | 1 | 89 | - | - | |
| Mepo3g01677 | 224 | SFLD | Glutathione Transferase (cytosolic) | 4 | 222 | IPR040079 | - | |
| Mepo3g01677 | 224 | Gene3D | - | 90 | 224 | - | - | |
| Mepo3g01677 | 224 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 217 | IPR010987 | - | |
| Mepo3g01677 | 224 | SUPERFAMILY | Thioredoxin-like | 8 | 108 | IPR036249 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo3g01677 | Mepo-Chr3 | 24973393 | 24976624 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo3g01677 | 4 | 223 | Glutathione S-transferase Gene Family | AT3G09270 | 54.018 | 1.47e-76 | 228 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo3g01677 | K00799 | - | gmx:100500680 | 324.324 |