Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01662 ATGGCTGAAGAGGGTTTTGAAAATTATCATATCCCACAACAAAGTAGAAGAGAAAAACTTCGTTATTTATCTCAAAACCAAACAAGTTTCATTGAATCTTCAACTACCCTTAACCCTAATTATTCACCTTTACCTTCTCTTTACGATCCTTCACTCATTTCTGCTATAGACGCTATAAACAGTAACCCTTTTCTTTATCAAAACCTTCGTCAAATGAATCATGTATACAACGATGGTGGTAGTAGTAGTAACAACAATGAAGCTATGTTGTTAAAATCTGAACCTTTATCTTTATCTTTATCATCAAACAAAAACAACCAGAATCAGATGAGTGCTAATTTTCAACGTTATGGTTCTGTTGTTGATGTTTCAAGGAACACGGTTCCATTAGGACCGTTTACGGGTTATGCTTCTGTTTTGAAGGGATCGAGGTTTTTGAAACCTGCACAACAATTATTGGATGGGATATGTGATGTTGGTGTTCGTGCTGAGAAGATTATTGCTGCTGCTGATGCATCTTTGATGGAAACTAATCATGTTAATGGTGTTGATGATGATACACTTGGTCATGATGGAAGGAAGAACAGGTCTAGATTATTAACGGTGCTTGATGAGGTTTGCAGGAGGTACAGACAGTACTATCAGCAGATTCATGCAGTAATAACTTCATTTGAATATGTTGCCGGCCTCGGTAACGCTGCTCCGTATGCAAGTTTGGCTATAAATGCCATGTCCAAACATTTTAGATTCTTGAAGAATGTGATTACTGACCAGCTTCAGTTTATCGGTAAGTCTAATTATCAGATAAGCAATAGAAAGGATGAATCTCCAAGGTTTCACAACGGCGATGGAGCCCTTTACAGTCAAAGGCCAGGGTTTATAGAACATGTCCAACAACCTGTTTGGCGACCTCAAAGGGGGCTCCCGGAGCGTGCTGTCAGTGTTCTTAGGGGATGGTTGTTTGAACACTTTTTGCATCCTTACCCTACTGATACCGACAAGCTAATGTTGGCTAAACAAACTGGTCTATCTCGTAACCAGGTGTCTAATTGGTTTATAAATGCAAGAGTAAGGCTTTGGAAGCCAATGGTGGAAGAAATACACATGCTTGAATCACAACAATCTCCAAAGGAATCACAAAGAGATGAACATAATCGAAACAATTTAAGCGAGAACAACATTGCTGAGAATCCATCTACCTCCACAGACAAGTTTATCGATGTTGCATATAAACGCACTAGAAACGAACTTCACAACATGTCAGTGCCAAATCATAGTATCGCAAGCAATCAACAAGTTGGTAATGTTGGAGTGAGCATGATGAATAATGGTGCAACATGCAATGGTGTATCTCTGACGCTCGGCCTTCATCAAAATCATGGAATTGGGTTATCCGAGCCTTTCAACATGAGTGCTGCGCAGCGTTTTGGTCTTGCACATCAACCTGATAGTTACGCCGCGAGTGGTTTTCAATTGCAGAATAGGCAATTTGGGAGAGATTTTATTGGTGGGCAACTTTTGCGTGACTATGTCAAAGTGAGGTTGTTGAAGCATTTGAGCCGCTTTGACAATGTAGTACAATGCATGGCCACTGAGAGTAAGTTGCTACAAGAACTTCCTTTGTCCCGCGTTAGGAGAAGCGAGGAGAAGAAAGCGCAGACAATCTTCCGATACCGCTCTAAGCACTACATGGTTTTTCGAAAAGTCTCCGATGGAGTTTCACAGGTTTCCGGAAGGAGTTTATTGCTGCCTTGCGGGAGAAGGGAAGATACAAAGGAAAGAAATTCAGGATTTGGTGGAGAGCAAGAAGGTAAGAAGGCATTTTATAGTAGAGAGAGACAACTATGTTGGAAAGAAGCAAAGAAGCATAAATGCCTTGAGATAGTGGATAATTAA 1896 0.4051 MAEEGFENYHIPQQSRREKLRYLSQNQTSFIESSTTLNPNYSPLPSLYDPSLISAIDAINSNPFLYQNLRQMNHVYNDGGSSSNNNEAMLLKSEPLSLSLSSNKNNQNQMSANFQRYGSVVDVSRNTVPLGPFTGYASVLKGSRFLKPAQQLLDGICDVGVRAEKIIAAADASLMETNHVNGVDDDTLGHDGRKNRSRLLTVLDEVCRRYRQYYQQIHAVITSFEYVAGLGNAAPYASLAINAMSKHFRFLKNVITDQLQFIGKSNYQISNRKDESPRFHNGDGALYSQRPGFIEHVQQPVWRPQRGLPERAVSVLRGWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEIHMLESQQSPKESQRDEHNRNNLSENNIAENPSTSTDKFIDVAYKRTRNELHNMSVPNHSIASNQQVGNVGVSMMNNGATCNGVSLTLGLHQNHGIGLSEPFNMSAAQRFGLAHQPDSYAASGFQLQNRQFGRDFIGGQLLRDYVKVRLLKHLSRFDNVVQCMATESKLLQELPLSRVRRSEEKKAQTIFRYRSKHYMVFRKVSDGVSQVSGRSLLLPCGRREDTKERNSGFGGEQEGKKAFYSRERQLCWKEAKKHKCLEIVDN 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01662 631 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 81 382 - -
Mepo3g01662 631 SUPERFAMILY Homeodomain-like 304 370 IPR009057 -
Mepo3g01662 631 CDD homeodomain 302 363 IPR001356 GO:0003677
Mepo3g01662 631 SMART prehox3 134 257 IPR006563 -
Mepo3g01662 631 MobiDBLite consensus disorder prediction 371 402 - -
Mepo3g01662 631 Gene3D - 305 367 - -
Mepo3g01662 631 Pfam Homeobox KN domain 319 358 IPR008422 GO:0003677|GO:0006355
Mepo3g01662 631 FunFam BEL1-like homeodomain protein 9 305 367 - -
Mepo3g01662 631 ProSiteProfiles 'Homeobox' domain profile. 299 362 IPR001356 GO:0003677
Mepo3g01662 631 MobiDBLite consensus disorder prediction 371 389 - -
Mepo3g01662 631 Pfam Associated with HOX 139 256 IPR006563 -
Mepo3g01662 631 SMART HOX_1 302 366 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01662 Mepo-Chr3 24809874 24815963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01662 135 371 Homeobox Transcription Factor Family AT1G19700 44.906 1.45e-65 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo3g01662 POX 1.8e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01662 3 24809874 24815963 Mepo3g01662 3 24809874 24815963 ECH