Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01658 ATGGCTCCAAGATCAGATAACATATCTGAGATCAGTCCGGTGAAGGAATCTTGGAGCATAGTTGTACGGATTTTCCATGCTTTGTTCGTGACGTCAATCGGAAACAAGATTCACGCCACTGTACGAAGAACTCTGATCTACAAATTTGAGAAGGACCTGCAGGAGGGAAAGGTCTACTCTATGAGTGGCTTTGGTGTTGCTGGGAATCTTGGATCTTATCGCACCACAAAGCACGAGTACAAACTCAATTTCCAATTTAACACCAAAGTGAAATTGTGTGGCAAAAATGGCGTGCCTTCCGATATCTATCCGATATCAAATCCTATTGATGTTTTCAATTCTGAATACGACACCGATTACTTAGCCGATGTCATGGGTATGTTGACCGGTGTTGGTTTAAATTTAAGGTTACTCTATTTGGACAATATGCTGAGGAACTTAATGCTTTTGTTGCTGTCGGGGAGACCGATAAGGTCATTGTGGTTGTCCTGCTGGCCAAAGTTAAGATCCGGTAAGAACACAATCTACTCTACTAAGCTGATTTTTAACCCTGATTTGATTGCTGCTCATGATCTAAAGAAAAGGATGGTTGGGAAGAACGGTGTTCCCTCTCCTGGAATAACTTTCCTTCAGGATCCGTCGAGGATTATCGAAGAGGAGGATTTTCTTAAGATCAGAGCGATGAAGACTGTCGAGGACTTGAAGGAGTGTACCATGGAGTCTTTCTTTGTTGTGAAGACTACGGTAAAATTTGTTATCGATACGAATGAGTGGTGGTACATTGCATGTGTTTGTAACAAGAAAGTAGTGCCGGATGAGAAAATGTACTTCTGCGCCAAGTGTAATAAGCATGTTATGCATGTTTCTCCTAGGTACATGATCAAAGTTCGCGTCATCGATGAGACTGACTCTGCAACATTTGTCATCTTTGATCGTGATGCTGCTCTTTTGCTGAAAAAAACCGCAACTGATATGATTGAGAGCATGGGGTCTGATGAGAGCGGAACGTTGCCTAAAGAAATTAGCTCCTTGGTTGATTCCACCTTTCTGTTTAAGGTGGAAACTAACATAAGCACTGATGCAAGGTTTGAAAAATCTTATCAGGTTCGCAGGATATCGATAAATGTAGAATTTATGAAAAAATTCACTAGGGTTCCTACTGAGGCTACAGTGGTTGAAGGCTCTTTTGAAGCGGTTGAAAATGCTGAAAATGATTCCTCTGTCAATGAGAACCTGCTCAAGAAGTTCGATGATTCGGAAGTGGTTGGGAGTAAGGATGTTGATGCTAAAAGGCTGTTGATCTTACCTGATAAGGTTGATGTGACTCCTGCAAAGCGTTCATGCCCATTTGATGATGAAGGCAGCGGTGGCAACAGACCGGTCAAGTAA 1389 0.4212 MAPRSDNISEISPVKESWSIVVRIFHALFVTSIGNKIHATVRRTLIYKFEKDLQEGKVYSMSGFGVAGNLGSYRTTKHEYKLNFQFNTKVKLCGKNGVPSDIYPISNPIDVFNSEYDTDYLADVMGMLTGVGLNLRLLYLDNMLRNLMLLLLSGRPIRSLWLSCWPKLRSGKNTIYSTKLIFNPDLIAAHDLKKRMVGKNGVPSPGITFLQDPSRIIEEEDFLKIRAMKTVEDLKECTMESFFVVKTTVKFVIDTNEWWYIACVCNKKVVPDEKMYFCAKCNKHVMHVSPRYMIKVRVIDETDSATFVIFDRDAALLLKKTATDMIESMGSDESGTLPKEISSLVDSTFLFKVETNISTDARFEKSYQVRRISINVEFMKKFTRVPTEATVVEGSFEAVENAENDSSVNENLLKKFDDSEVVGSKDVDAKRLLILPDKVDVTPAKRSCPFDDEGSGGNRPVK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01658 462 CDD RPA1_DBD_A_like 19 90 - -
Mepo3g01658 462 Gene3D - 5 93 IPR012340 -
Mepo3g01658 462 Pfam Replication factor-A C terminal domain 242 359 IPR013955 -
Mepo3g01658 462 SUPERFAMILY Nucleic acid-binding proteins 229 371 IPR012340 -
Mepo3g01658 462 Pfam Domain of unknown function DUF223 33 96 IPR003871 -
Mepo3g01658 462 SUPERFAMILY Nucleic acid-binding proteins 6 93 IPR012340 -
Mepo3g01658 462 PANTHER OS03G0429900 PROTEIN 211 357 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mepo3g01658 462 Gene3D - 218 383 IPR012340 -
Mepo3g01658 462 CDD RPA1_DBD_C 228 372 IPR047192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01658 Mepo-Chr3 24671818 24674925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01658 8 302 Core DNA Replication Machinery Family AT2G06510 22.254 1.94e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01658 - - mtr:25497071 451.825