Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01636 ATGGATGATGATATTGCTGCTAATTCAAAGATGTCATTGTCTCTGAGTTTAGGAGGAAGGAGAAGTGGAGGATCTTCATCCAAATCCCTTAAGATCCATGAGGAGCTGAGGGAATACCCATGTAAGTTCTGCAACAAGAAGTTTTCAAGTTCTCAAGCCTTGGGAGGACACCAAGGTGCCCATAGGCGTGAAAGAGTGCTTGCTAGAATTGAAAAAGAAATTCAATTAGGAACGTTTGGACTTGGGGATCATCATCTGTGTCCACATTCAATTTATCACCCATATCCCTTCACTGTTGCAGGGTCGTCACCTTTTTATCATGGACTTGAATGGCCTCAACTTGTTGCCCGTGCAAGCTATGACAACCCATTTGGGATGATCAATAACTCTGCTTGGGCTACCCAAACTTCACTGAATAATAATGTGGGATTTGGAAATTTTGAACTTAATAATCAACTGCAGTTTCTCAATCTTTGA 477 0.4151 MDDDIAANSKMSLSLSLGGRRSGGSSSKSLKIHEELREYPCKFCNKKFSSSQALGGHQGAHRRERVLARIEKEIQLGTFGLGDHHLCPHSIYHPYPFTVAGSSPFYHGLEWPQLVARASYDNPFGMINNSAWATQTSLNNNVGFGNFELNNQLQFLNL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01636 158 Gene3D Classic Zinc Finger 24 78 - -
Mepo3g01636 158 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Mepo3g01636 158 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 25 147 IPR044246 GO:0009788
Mepo3g01636 158 SUPERFAMILY beta-beta-alpha zinc fingers 37 66 IPR036236 -
Mepo3g01636 158 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Mepo3g01636 158 Pfam C2H2-type zinc finger 39 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01636 Mepo-Chr3 24300262 24300738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01636 4 125 C2H2 Transcription Factor Family AT1G24625 34.884 1.56e-13 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g01636 zf-C2H2_6 1.6e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01636 - - tpra:123904723 196.438