Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01615 ATGTCTTATAGCTATTTCCCCATTGCTTTCCAAAGAAAGATGGAATACACCCAAAACCCTAATAAATCTGACCAAATAAGATGGAGCTCTGACGATCCTGGTCAAGTTAGGTCTTATTCTTGTACTTTTTGCAAGAGAGGATTCTCTAATGCACAAGCATTAGGAGGCCACATGAATATCCATAGAAGAGATAGAGCCAAACTCAAACAACAATCTTCTGAAGAAAATTTGCTTTCTTTGGATATCTCAAACAAAAACCCTAATGATCAAGTTGATTTGGAAGAGAATCATGAAACTCAAAGGGGTAAGTTAATTACTACAAAAGAACTTCCTCATAGTTCTCCATTTGTTGACATAAGGGGGTCCAGTGGTGTTATGGCTCAAAGGATTGAAGAGAAGAAATGTGATTTAGACCTTGAGCTTAGGTTAGGTTATCAGCCAATGGATTCATCAACATTGAGCACTCGATCATTTTTCTGA 480 0.3729 MSYSYFPIAFQRKMEYTQNPNKSDQIRWSSDDPGQVRSYSCTFCKRGFSNAQALGGHMNIHRRDRAKLKQQSSEENLLSLDISNKNPNDQVDLEENHETQRGKLITTKELPHSSPFVDIRGSSGVMAQRIEEKKCDLDLELRLGYQPMDSSTLSTRSFF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01615 159 Gene3D Classic Zinc Finger 15 103 - -
Mepo3g01615 159 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Mepo3g01615 159 PANTHER OS07G0101800 PROTEIN 22 146 - -
Mepo3g01615 159 SUPERFAMILY beta-beta-alpha zinc fingers 37 65 IPR036236 -
Mepo3g01615 159 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01615 Mepo-Chr3 24009240 24009719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01615 14 106 C2H2 Transcription Factor Family AT3G09290 44.660 7.21e-20 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g01615 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01615 - - mtr:25498560 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01615 3 24009240 24009719 Mepo3g01615 3 24009240 24009719 ECH