Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01612 ATGCATCTTCAATTCTTGATACCATTTTCATTCTTCTTTTTTCTACCAGTTTTGTCTCAAGTTGACCAACTACTATACACAGGTTTTAAGGATGTTGGTCCAAAAAACCTAACCTTAAATGGTATAGCAGAGATAGAAAAAAATGGTATAATAAGATTAACAAATGAAACAAGTAGATTATTGGGTCATGCTTTTTATCCTCAACCATTTCAGATAAAGAACAAAACAACTGGTAAAGTTTTCTCTTTCTCTTCATCTTTTGCTCTTGCTTGTGTTCCTGAATATCCTAAACTTGGTGGCCATGGCATGGCTTTTACTATAGTCCCTTCAAAAGATCTTAAAGCTTTACCTAGTCAATATCTTGGTCTTCTAAACTCTAGTGATGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGTTCAAGATTTTGAGTTTGGTGATATTAATGATAACCATGTTGGTATAGATATTAATAGTATGCGTTCAAATGCAACTATTACTGCTGGTTATTATAGTGATGATGGTATGGTACATAATATTAGTATTAAAGGTGGAAAACCAATTTTAGTTTGGGTTGATTATGATTCTTCATTGAATCTTATTAGTGTTACACTTTCACCAACTTCAAATAAGCCTAAAAAACCAATATTGAGTTTTCATATGGATCTATCACCTCTTTTTCTTGATACTATGTATGTTGGTTTCTCTGCTTCAACTGGTTTACTTGCTAGCTCTCATTACATTTTGGGATGGAGTTTCAAAATTAATGGGCCGGCGCCGTTTCTTGATTTGTCTAAACTACCACAGCTTCCTCATCCTAAGAAGAAACATACTTCTTTGATACTCGGTGTTTCACTTGGATCTGCTTTGATTGTATTGTGTTCTATGGCATTTGGTTTTTATGTTTATAGAAAAATCAAGAATGCTGATGTAATTGAAGCTTGGGAGCTTGAAGTTGGACCACATAGATATACTTATCAAGAGCTCAAGAAAGCTACAAAAGGTTTCAAGGAGAAACAGTTGCTTGGGCAGGGTGGTTTTGGCAAAGTTTACAATGGGATATTGCCGAAATCGAAGATTCAAGTGGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGGTTGAGGGAATTTGTGTCGGAAATCGCTAGCATAGGTCGGCTTCGTCACCGGAATTTGGTTATGTTACTTGGTTGGTGTCGTCGACGAGGTGACCTTTTGCTTGTGTACGATTTCATGGCGAATGGAAGCTTGGACAAGTACTTGTTTGAAGATTCAGAATTTGTGCTAAATTGGGAACAGAGGTTTAAGATAATAAAGGGTGTTGCTTCAGGTCTTTTGTATCTACATGAAGGCTATGAGCAAGTGGTAATCCATAGAGATGTTAAAGCTAGCAATGTGCTCTTGGATTTTGAACTCAATGGAAGATTAGGCGATTTCGGATTGGCAAGGTTGTATGAACATGGTGCTAATCCCGGCACGACAAGAGTGGTGGGAACATTAGGCTATTTGGCGCCGGAGTTACCTAGGACAGGACGAGCAACAACAAGCTCCGATGTTTTTGCATTCGGAGCTCTTCTTCTCGAGGTTGTTTGCGGAAGAAGGCCTATTGAACCTAAGGCATCACAAGATGAGTTGGTGTTGGTGGATTGGGTGTGGGAAAGGTTCAAAGAAGGAAGAGCATTTGAAGTAGTTGACCCTAAATTGAATGGTGACTTTGTTGAAACTGAGGTAATGATGGTGTTGAAATTAGGTTTGATATGTTCAAATGATGTTCCAACTATAAGGCCTAGTATGAGACAAGTAGTGAGGATTTTGGATGGAGAAGTTGAGTTACCAAATGAAATGAGAAAGCCAGGTGGTATTGATTCACAAGAGGGGTTTGATGAATTTTTGAATTCTCTTGGAACTTCTAACTCATTTGATCAAATGAGTTCAAACTCTTATAATGGAAAGAGAGGTATTGATAATACTAGTTTTATCACTTTTGGTAATTCACCTCAATCATCACTTCTCAATGCCAAAGGAGAAACAAGGTGA 2052 0.3738 MHLQFLIPFSFFFFLPVLSQVDQLLYTGFKDVGPKNLTLNGIAEIEKNGIIRLTNETSRLLGHAFYPQPFQIKNKTTGKVFSFSSSFALACVPEYPKLGGHGMAFTIVPSKDLKALPSQYLGLLNSSDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGIDINSMRSNATITAGYYSDDGMVHNISIKGGKPILVWVDYDSSLNLISVTLSPTSNKPKKPILSFHMDLSPLFLDTMYVGFSASTGLLASSHYILGWSFKINGPAPFLDLSKLPQLPHPKKKHTSLILGVSLGSALIVLCSMAFGFYVYRKIKNADVIEAWELEVGPHRYTYQELKKATKGFKEKQLLGQGGFGKVYNGILPKSKIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVMLLGWCRRRGDLLLVYDFMANGSLDKYLFEDSEFVLNWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGRATTSSDVFAFGALLLEVVCGRRPIEPKASQDELVLVDWVWERFKEGRAFEVVDPKLNGDFVETEVMMVLKLGLICSNDVPTIRPSMRQVVRILDGEVELPNEMRKPGGIDSQEGFDEFLNSLGTSNSFDQMSSNSYNGKRGIDNTSFITFGNSPQSSLLNAKGETR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01612 683 ProSiteProfiles Protein kinase domain profile. 340 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01612 683 Gene3D Transferase(Phosphotransferase) domain 1 417 625 - -
Mepo3g01612 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 280 IPR013320 -
Mepo3g01612 683 SMART serkin_6 340 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01612 683 FunFam Lectin-domain containing receptor kinase A4.3 325 416 - -
Mepo3g01612 683 Pfam Legume lectin domain 24 271 IPR001220 GO:0030246
Mepo3g01612 683 SUPERFAMILY Protein kinase-like (PK-like) 322 622 IPR011009 -
Mepo3g01612 683 CDD STKc_IRAK 346 612 - -
Mepo3g01612 683 Pfam Protein kinase domain 340 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01612 683 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Mepo3g01612 683 FunFam L-type lectin-domain containing receptor kinase S.4 20 264 - -
Mepo3g01612 683 FunFam L-type lectin-domain containing receptor kinase S.4 417 623 - -
Mepo3g01612 683 Gene3D - 23 260 - -
Mepo3g01612 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Mepo3g01612 683 PANTHER - 40 617 - -
Mepo3g01612 683 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Mepo3g01612 683 CDD lectin_legume_LecRK_Arcelin_ConA 23 261 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01612 Mepo-Chr3 23960741 23963210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01612 17 673 Receptor kinase-like Gene Family AT3G55550 58.408 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mepo3g01612 Pkinase 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01612 - - gmx:100784346 1040.8