Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01585 ATGGCATTGTCAAGTCCTACCATTTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCAATTTCAACAAATTTCATCATCAAGAGTTTCTATATTAGAAAGGAGTTTGAGTAAGATTGAAAATAAGTATACTTTGAAAATCAAATGCTTTGGCAATGGGTTGGGTGATGATGGATATAGGTGGAGGAAGTATGGTCAGAAATCCATCAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGGTGTGGAGCTAAGAAGCAGGTTGAGAGATCCAATGAAGACCCTGATACTCTCATAATCACTTATGAAGGACTCCACTTGCACTTTGCTTATCCTTATTTCATAGTGGGCCAATCACATCAATCTCCTTCTGATCCACCAATCAAGAAGTCCAAGCCTACCTCTTCACAAGGACCAACCCAAGACCATAAAGCAAGTGAAGTTCATGAAGTCCAGAATATACAAGAAGTCCATGAAGCTCAATCTAGTACTTCTTTGGGACTCATTTCACCCATTTTATTGGACCGTACACAAGATGCGGTCCAAGAAAATTTCGGCTCAGAAGGGTTGCTTGAAGATATGGTCCCGTTCATGGTTAGAAACCCTACAAACAATGTTGATGGTGATGATTACTCAAAATATTCCTTCTCCTCACACCTTTCTCCTCCACCATCATGGACTTCTGGTTGTTCCACTTCCACTGCTTGTTATGCCGTTGGCTTAAATTATAGCATTTAA 759 0.3979 MALSSPTISDIENALLVTNHSNQFQQISSSRVSILERSLSKIENKYTLKIKCFGNGLGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSNEDPDTLIITYEGLHLHFAYPYFIVGQSHQSPSDPPIKKSKPTSSQGPTQDHKASEVHEVQNIQEVHEAQSSTSLGLISPILLDRTQDAVQENFGSEGLLEDMVPFMVRNPTNNVDGDDYSKYSFSSHLSPPPSWTSGCSTSTACYAVGLNYSI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01585 252 MobiDBLite consensus disorder prediction 127 149 - -
Mepo3g01585 252 FunFam WRKY transcription factor 43 119 - -
Mepo3g01585 252 SUPERFAMILY WRKY DNA-binding domain 57 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g01585 252 ProSiteProfiles WRKY domain profile. 53 118 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01585 252 SMART WRKY_cls 58 117 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01585 252 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 35 149 IPR044810 GO:0003700
Mepo3g01585 252 MobiDBLite consensus disorder prediction 127 153 - -
Mepo3g01585 252 Pfam WRKY DNA -binding domain 59 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01585 252 Gene3D WRKY domain 55 111 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01585 Mepo-Chr3 23527849 23531930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01585 4 212 WRKY Transcription Factor Family AT5G43290 46.667 1.04e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g01585 WRKY 6.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01585 - - tpra:123889134 350.517