LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g01585	ATGGCATTGTCAAGTCCTACCATTTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCAATTTCAACAAATTTCATCATCAAGAGTTTCTATATTAGAAAGGAGTTTGAGTAAGATTGAAAATAAGTATACTTTGAAAATCAAATGCTTTGGCAATGGGTTGGGTGATGATGGATATAGGTGGAGGAAGTATGGTCAGAAATCCATCAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGGTGTGGAGCTAAGAAGCAGGTTGAGAGATCCAATGAAGACCCTGATACTCTCATAATCACTTATGAAGGACTCCACTTGCACTTTGCTTATCCTTATTTCATAGTGGGCCAATCACATCAATCTCCTTCTGATCCACCAATCAAGAAGTCCAAGCCTACCTCTTCACAAGGACCAACCCAAGACCATAAAGCAAGTGAAGTTCATGAAGTCCAGAATATACAAGAAGTCCATGAAGCTCAATCTAGTACTTCTTTGGGACTCATTTCACCCATTTTATTGGACCGTACACAAGATGCGGTCCAAGAAAATTTCGGCTCAGAAGGGTTGCTTGAAGATATGGTCCCGTTCATGGTTAGAAACCCTACAAACAATGTTGATGGTGATGATTACTCAAAATATTCCTTCTCCTCACACCTTTCTCCTCCACCATCATGGACTTCTGGTTGTTCCACTTCCACTGCTTGTTATGCCGTTGGCTTAAATTATAGCATTTAA	759	0.3979	MALSSPTISDIENALLVTNHSNQFQQISSSRVSILERSLSKIENKYTLKIKCFGNGLGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSNEDPDTLIITYEGLHLHFAYPYFIVGQSHQSPSDPPIKKSKPTSSQGPTQDHKASEVHEVQNIQEVHEAQSSTSLGLISPILLDRTQDAVQENFGSEGLLEDMVPFMVRNPTNNVDGDDYSKYSFSSHLSPPPSWTSGCSTSTACYAVGLNYSI	252

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g01585	252	MobiDBLite	consensus disorder prediction	127	149	-	-
	Mepo3g01585	252	FunFam	WRKY transcription factor	43	119	-	-
	Mepo3g01585	252	SUPERFAMILY	WRKY DNA-binding domain	57	115	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mepo3g01585	252	ProSiteProfiles	WRKY domain profile.	53	118	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mepo3g01585	252	SMART	WRKY_cls	58	117	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mepo3g01585	252	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	35	149	IPR044810	GO:0003700
	Mepo3g01585	252	MobiDBLite	consensus disorder prediction	127	153	-	-
	Mepo3g01585	252	Pfam	WRKY DNA -binding domain	59	115	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mepo3g01585	252	Gene3D	WRKY domain	55	111	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g01585	Mepo-Chr3	23527849	23531930	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g01585	4	212	WRKY Transcription Factor Family	AT5G43290	46.667	1.04e-49	162

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mepo3g01585		WRKY	6.2e-26	CL0274