Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01556 ATGTCGGATATGAAAGATAGACAGCGGTGGAGAGCGGAAGAGGATGCATTATTACGCGCTTATGTCAAACAGTACGGTCCTAGGGAATGGAACCTTGTGTCTCAGCGCATGAACACGCCTCTTAACAGGGACGCAAAATCGTGTTTAGAAAGGTGGAAGAATTACCTCAAGCCAGGTATTAAGAAAGGTTCTCTCACTGAAGAAGAACAGCGTCTTGTCATTAGCCTTCAAGCGACACACGGAAACAAATGGAAGAAAATTGCCGCGCAAGTTCCCGGTCGAACTGCTAAGAGGTTAGGGAAGTGGTGGGAAGTATTCAAAGAGAAGCAACAAAGAGAAACAAAAGGTAGTATTAACAGAACTGTCGACCCGATTAACGATAGCAAGTACGAACACATACTCGAAAGTTTTGCCGAGAAACTAGTGAAAGAGAGACCCTCTCCTTCATTTGTCATGGCCGCTTCCAATAGTTCTTATCTTCATACTGATGCACAAGCACCAACATCGGGATTGCTTCCTTCATGGCTATCGAATTCAAACAATGCAGCTCCTGTTAGGCCAAATTCACCATCAGTGACACTAAGCCTATCTCCCTCGACAGTAGCAGCGCCTCCTCCGTGGATGCAACCTGTACGAGGACCGGACAACGCGCCTCTTGTTCTTGGGAACGTAGCTCCACATGGCGCTGTTCTAAGTTATGGCGAAAGCATGGCAATGTCTGAATTGGTTGATTGCTGTAAGGAGTTGGAAGAAGTGCATCATGCATTGGCAGCGCACAAGAAAGAAGCTGCATGGAGGTTAAGCCGAGTGGAGCTGCAGTTGGAGTCAGAGAAAGCAAGTCGTCGGAGGGAGAAGATGGAGGAAATCGAAGCGAAGGTAAAAGCTTTAAGGGAGGAACAAGCAGTTGCTTTGGATAGAATTGAAGGAGAATATAGGGAACAGTTAGCAGGGCTGAGAAGAGATGCTGAAACCAAAGAGCAGAAATTGACTGAACAATGGGCTGCGAAGCATTTGCGTCTTACTAAGTTTCTAGAACAAGTAGGGTGTAGATCAAGGCATGCTGAATCAAATGGAAGATAG 1080 0.463 MSDMKDRQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVISLQATHGNKWKKIAAQVPGRTAKRLGKWWEVFKEKQQRETKGSINRTVDPINDSKYEHILESFAEKLVKERPSPSFVMAASNSSYLHTDAQAPTSGLLPSWLSNSNNAAPVRPNSPSVTLSLSPSTVAAPPPWMQPVRGPDNAPLVLGNVAPHGAVLSYGESMAMSELVDCCKELEEVHHALAAHKKEAAWRLSRVELQLESEKASRRREKMEEIEAKVKALREEQAVALDRIEGEYREQLAGLRRDAETKEQKLTEQWAAKHLRLTKFLEQVGCRSRHAESNGR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01556 359 CDD SANT 66 107 IPR001005 -
Mepo3g01556 359 Gene3D - 7 61 - -
Mepo3g01556 359 Coils Coil 308 332 - -
Mepo3g01556 359 SUPERFAMILY Homeodomain-like 7 101 IPR009057 -
Mepo3g01556 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Mepo3g01556 359 FunFam MYB-related transcription factor 7 61 - -
Mepo3g01556 359 ProSiteProfiles Myb-like domain profile. 2 56 IPR001005 -
Mepo3g01556 359 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Mepo3g01556 359 CDD SANT 9 56 IPR001005 -
Mepo3g01556 359 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 4 355 - -
Mepo3g01556 359 Pfam Myb-like DNA-binding domain 10 70 - -
Mepo3g01556 359 Coils Coil 269 306 - -
Mepo3g01556 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 56 IPR017930 -
Mepo3g01556 359 SMART sant 61 109 IPR001005 -
Mepo3g01556 359 SMART sant 6 58 IPR001005 -
Mepo3g01556 359 Gene3D - 65 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01556 Mepo-Chr3 22999032 23002133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01556 4 350 MYB Transcription Factor Family AT2G37630 67.030 1.32e-159 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g01556 Myb_DNA-bind_6 3.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01556 K09422 - gmx:100819082 618.616