Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01554 ATGGATGAGTTTGAATCAGAGGTTTGTTGTTTGGAGAATAAACAATCAACTGTTGCTTCTTGCTCATCTGTGTCTGAAGGCAGTGATAGTATAATTCAAAAGTCTCCCAGGATATGTAGCCCCACGGCTACATCCACATCGCCTTCACATCGGAGGACAACAGGTCCTATAAGGCGCGCTAAGGGTGGTTGGACAGCAGAGGAGGATGAGACATTAAGGAATGCCGTTGCAGCTTTTAAGGGAAAGCATTGGAAAAAAATAGCTGAGTTTTTTGCTGATAGATCAGAAGTTCAATGTCTGCACAGATGGCAAAAAGTTCTCAATCCAGAACTTGTTAAGGGACCATGGACACAGGAGGAGGATGATAAAATTGTTGAACTGGTGGCAAAGTATGGGCCTACAAAATGGTCCTTGATTGCCAAGTCTTTGCCTGGTCGAATAGGGAAACAGTGTCGAGAAAGGTGGCACAATCATCTTAATCCTGATATAAAGAAGGATGCCTGGACTTTGGAAGAGGAACTAGCCTTGATGAATGCTCATCGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTTCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCTTTGAAGAAGAAGTTAGATTTCTACTTAGCTACAGGAAAACTCCCACCAATTCCAAAAAGCAATCCACTAGTTGCTGCCAAAGATACAATTAAACGTTCTGCTTCTAAAACAATACTTGTTTCATCTAATAAAGAACTAAATGTGGCTGTTGAAGCATCGTCTGAAACTACAGCCATTAGTAAGCCAGATGACAGTGGCAAGAATCAGTTTGAGTCCTCAGGAACAGCTAGAGAAGTTGGTGATTCTTCAAGTCTCCCGGCAAATGAATCTGCTGATTCTGACTGTGTAGAAGGCAAGCCTGGACCATCCAATGTTGATCCTAGCTGTGGAAACTCGGAGCATATATCAAGAGCTAATTTTGGAACAACTTACGGGCCAAAATATGAGAATTCTGCACTCAATGGAAACTCAATAACTGAGCATTGTTTAAACAATGGTAAAATGAGAAATAGTAGTAGCGGGTTAATCAGGACATCTACACAAGAAAATCAGACTTGGGGTTCTTTGTGTTACGAGCCGCCACTTTTAGCTGGTTCAGTTCCTTTAGATTCTCTTCATTTAAGTATTCTCTGCATGCAGGACGATTACTGTTCTAAGTTGTCACCCATTGGTTACACCACTCCACCTCGCGCGAGGGTTAGTGAATTATGTACGGAGACCCCTGAATCTATATTGAGAAAGGCTGCAAATACTTATCCAAATACTCCTTCCATATTTAGGAGGAGAAGAACTGGAGTCCAACCACTAACTTCTCCTAGTAAAGTTTTAAAAGTCGACAATGATTCACATGCTTCTAATGAACCATATAGAACCAAGAATAATTCTGATTCTGAAGCTCAGACATTGTCTGAGAGTCCCGCAAGCCGTGACAATAAGGCTTTCAATGCATCACCGCCATACCGGTTAAGAACCAAACGGACAGCAGTTGTCAAGTCTGTGGAGAAACAACTTGAGTTTGCGTTTGACAAAGAGAAGAATGATGACAACATGAGTGCAATGGAAAAATCTACAAAGAGGAGCAATGTTATGACTGAGGATCGTCTGCATGAAAGAAAATTGGTAGCAACGTAG 1698 0.4164 MDEFESEVCCLENKQSTVASCSSVSEGSDSIIQKSPRICSPTATSTSPSHRRTTGPIRRAKGGWTAEEDETLRNAVAAFKGKHWKKIAEFFADRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVAKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLEEELALMNAHRIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLATGKLPPIPKSNPLVAAKDTIKRSASKTILVSSNKELNVAVEASSETTAISKPDDSGKNQFESSGTAREVGDSSSLPANESADSDCVEGKPGPSNVDPSCGNSEHISRANFGTTYGPKYENSALNGNSITEHCLNNGKMRNSSSGLIRTSTQENQTWGSLCYEPPLLAGSVPLDSLHLSILCMQDDYCSKLSPIGYTTPPRARVSELCTETPESILRKAANTYPNTPSIFRRRRTGVQPLTSPSKVLKVDNDSHASNEPYRTKNNSDSEAQTLSESPASRDNKAFNASPPYRLRTKRTAVVKSVEKQLEFAFDKEKNDDNMSAMEKSTKRSNVMTEDRLHERKLVAT 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01554 565 FunFam Transcriptional activator Myb isoform A 60 112 - -
Mepo3g01554 565 CDD SANT 115 159 IPR001005 -
Mepo3g01554 565 ProSiteProfiles Myb-like domain profile. 108 159 IPR001005 -
Mepo3g01554 565 ProSiteProfiles Myb-like domain profile. 160 210 IPR001005 -
Mepo3g01554 565 SUPERFAMILY Homeodomain-like 62 117 IPR009057 -
Mepo3g01554 565 Gene3D - 60 112 - -
Mepo3g01554 565 ProSiteProfiles Myb-like domain profile. 56 107 IPR001005 -
Mepo3g01554 565 MobiDBLite consensus disorder prediction 262 321 - -
Mepo3g01554 565 MobiDBLite consensus disorder prediction 262 299 - -
Mepo3g01554 565 Pfam Myb-like DNA-binding domain 113 159 IPR001005 -
Mepo3g01554 565 Pfam Myb-like DNA-binding domain 165 208 IPR001005 -
Mepo3g01554 565 Pfam Myb-like DNA-binding domain 61 107 IPR001005 -
Mepo3g01554 565 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 164 214 IPR017930 -
Mepo3g01554 565 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 163 IPR017930 -
Mepo3g01554 565 SMART sant 164 212 IPR001005 -
Mepo3g01554 565 SMART sant 60 109 IPR001005 -
Mepo3g01554 565 SMART sant 112 161 IPR001005 -
Mepo3g01554 565 FunFam Transcriptional activator Myb isoform A 113 165 - -
Mepo3g01554 565 SUPERFAMILY Homeodomain-like 110 206 IPR009057 -
Mepo3g01554 565 FunFam Transcription factor MYB3R-2 166 230 - -
Mepo3g01554 565 MobiDBLite consensus disorder prediction 444 468 - -
Mepo3g01554 565 Gene3D - 113 164 - -
Mepo3g01554 565 CDD SANT 64 107 IPR001005 -
Mepo3g01554 565 MobiDBLite consensus disorder prediction 533 565 - -
Mepo3g01554 565 CDD SANT 167 210 IPR001005 -
Mepo3g01554 565 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 107 IPR017930 -
Mepo3g01554 565 MobiDBLite consensus disorder prediction 444 509 - -
Mepo3g01554 565 PANTHER MYB PROTEIN-RELATED 61 146 - -
Mepo3g01554 565 Gene3D - 166 230 - -
Mepo3g01554 565 MobiDBLite consensus disorder prediction 476 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01554 Mepo-Chr3 22960961 22968606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01554 51 538 MYB Transcription Factor Family AT5G02320 50.389 1.94e-140 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g01554 Myb_DNA-binding 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01554 K09422 - gmx:100793280 884.404