Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01550 ATGGCTACTACTCTTGATTACTCATGCACCCCACCAAAAACCCCCAACAACAACAACCCCATTTCAGTTTCCAAGGTAAGGGTCATAGTTAGGGTTAGACCCTTCCTCTCTCACGAAATCACAAGAAATGGTGATGACCCAGTTTCTTGTATCTCACTTTTAGATCAAGATTTTCAATCCCAGAATGATGTAGCAGTTTATCTCAAAGACCCATTTACCAGTCGGAACGAGTGTTACAAGTTGGATTCATTCTTTGATCAAGAGGATAACAATGTGGGTCAGATATTTGAGAGAGAAGTTAATCCGATGATACCGGCTATATTCGGTGGATGTAATGCTACTGTGTTTGCTTATGGTGCTACTGGTAGTGGAAAGACATATACTATGCAGGGAACTGAAGAACAACCTGGCTTGATGCCGTTGGCAATGTCCGCTATCCTGTCTATTTGTCAAAACACTGGTAGCACAGCTCAAATTTCATACTATGAGGTCTACATGGACCGATGTTACGACCTCTTAGAGTTAAAAGCGAGTGAGATTTCAGTCCTGGATGACAAAGATGGCCATATTCACCTCAGGGGACTATCTCAAGTTCCTGTAAATACAATGTCTGAATTTCAAGAGGTCTTCTCCAGTGGTATTCAGAGGCGCAAAACTGCACACACAGGCCTCAATGACGTATCCAGCAGGAGTCATGGAGTGCTTGTGATATCTGTACTATCGACTCCTCCTGATGGGAATGGAAGTCTTGTATATGGAAAACTGAACCTCATAGACTTGGCAGGTAATGAAGACAATAGAAGGAGCTGCAATGAAGGGATTCGTCTTCAAGAGAGTGCTAAGATAAATCAGTCCTTGTTTGCACTGTCAAATGTGATATATGCGTTGAACAACAACAAACCAAGAACACCCTATAGAGACAGCAAATTGACCCGTATATTGCAAGACTCTCTAGGGGGATCTAGTCGTGCCCTCATGGTTGCTTGCCTGAATCCAGGAGAATATCAGGAATCTGTTCATACTGTTAGTTTGGCTGCTCGATCAAGGCACGTCTCTAATTTTGTACCTTCAGCTCATAAACTAGAGACACCAAAAGTTAACGTTGACATGGAAACCAAATTGAAAGCTTGGCTAGAATCAAGAGGTAAGACAAAGAGCTCACAACAAAGACTTGGAGTATTTAATTCTCCACTTGTGCAAAAAACTCCCGGTCCCACCATTACCTCTGCTAAGAGATCAGTTACTTTCAATAACTCGGTGAAGGGTGGCAGAACTTTCATCAACCAAAGAGCTCAACATACTACTGAGAGGGCCTTTGGTGTCTCTTTTAGAAATTTACTAGATGGTGAAGTTGCTTTTGATTCTTGCAAAAAGAACATGCATTGTGGTGTTGAGGACAATGATAAGAGAGAGACTGAGCATGAGGCCAATAAGGTAGCACTGGAATCATATACTGATCTACCTGATGAACCATTAAGCAAAGATGTACCAGCAGTACTACAAAGTCCATTAAGAAAAGCGCTCTCTCCCATCAACATCAATGGTATTAAAAACCACCTTGAGGCCATGTCTTTGACACGGACACCTTTTTCTGCAACCTGCTCCACTAAGAAAGGGTTGCAGGAAAATGGCACTCCACTGGACAAATTCAGTGCAAGAAGTTCTGCTTTGAAGAACTGTCTCGTTCAAGAATACATTGATTTTTTAAATAATGCAAGCAGAGAGGAGCTACTAGAGTTAAAGGGCATAGGAGACAAAATGGCAGATTACATTATAGACCTCAGAGAAGAAAGTCCACTAAAATCGTTAAGTGACCTGGAGAAGATTGGTCTCTCTTTGAAGCAGGCACATAACCTGTTCACTAAAGCTGCAAAAAAACTCTTTGATGACAAAGCAGAAGATTCAATACTCAATTGA 1917 0.4168 MATTLDYSCTPPKTPNNNNPISVSKVRVIVRVRPFLSHEITRNGDDPVSCISLLDQDFQSQNDVAVYLKDPFTSRNECYKLDSFFDQEDNNVGQIFEREVNPMIPAIFGGCNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSAILSICQNTGSTAQISYYEVYMDRCYDLLELKASEISVLDDKDGHIHLRGLSQVPVNTMSEFQEVFSSGIQRRKTAHTGLNDVSSRSHGVLVISVLSTPPDGNGSLVYGKLNLIDLAGNEDNRRSCNEGIRLQESAKINQSLFALSNVIYALNNNKPRTPYRDSKLTRILQDSLGGSSRALMVACLNPGEYQESVHTVSLAARSRHVSNFVPSAHKLETPKVNVDMETKLKAWLESRGKTKSSQQRLGVFNSPLVQKTPGPTITSAKRSVTFNNSVKGGRTFINQRAQHTTERAFGVSFRNLLDGEVAFDSCKKNMHCGVEDNDKRETEHEANKVALESYTDLPDEPLSKDVPAVLQSPLRKALSPININGIKNHLEAMSLTRTPFSATCSTKKGLQENGTPLDKFSARSSALKNCLVQEYIDFLNNASREELLELKGIGDKMADYIIDLREESPLKSLSDLEKIGLSLKQAHNLFTKAAKKLFDDKAEDSILN 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01550 638 SUPERFAMILY RuvA domain 2-like 563 609 IPR010994 -
Mepo3g01550 638 SMART kinesin_4 23 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mepo3g01550 638 Gene3D Kinesin motor domain 10 351 IPR036961 -
Mepo3g01550 638 MobiDBLite consensus disorder prediction 1 20 - -
Mepo3g01550 638 Gene3D - 555 626 - -
Mepo3g01550 638 PRINTS Kinesin heavy chain signature 254 272 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mepo3g01550 638 PRINTS Kinesin heavy chain signature 222 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mepo3g01550 638 PRINTS Kinesin heavy chain signature 110 131 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mepo3g01550 638 PRINTS Kinesin heavy chain signature 303 324 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mepo3g01550 638 ProSitePatterns Kinesin motor domain signature. 253 264 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mepo3g01550 638 CDD KISc_KID_like 26 349 - -
Mepo3g01550 638 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 24 356 IPR027640 GO:0003777|GO:0007018
Mepo3g01550 638 FunFam Kinesin-like protein 22 392 - -
Mepo3g01550 638 ProSiteProfiles Kinesin motor domain profile. 25 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mepo3g01550 638 FunFam Kinesin-like protein KIN-10C 555 627 - -
Mepo3g01550 638 Pfam Kinesin motor domain 31 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mepo3g01550 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 351 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01550 Mepo-Chr3 22923760 22929011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01550 25 383 Calmodulin-binding Proteins AT5G65930 30.894 8.08e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01550 K10403 - gmx:100804591 941.028