Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01541 ATGTCTCCACCTGGTTCATCAAGATGGAGCCCTACAACTGAACAACTTATGATCTTAGAGGAACTGTATAGAAGTGGAATTAGAACTCCTAGTGCTGTTCAAATTCAGCAAATAACTACTCACCTTTCTTTCTATGGTAGGATAGAAGGAAAAAATGTTTTCTATTGGTTTCAGAATCATAAGGCTAGGGATAGACAGAAGTTAAGAAGGAAACTTAACAAACAACTGCAGCTACAGCAGCAGCAGCAACAACATCAACAACAACAACTACAAGTTCATCATTGTCAACTCAATCATAATAATATGATTAGTAACCATTTTGTTGGTGGTACTTTTGGTTACCCTTTTGGATCTAATTCACATGACTTTTCCTTTTTTAACTCACCTAGCTTGCTTTTTGAGGGATCAGTAGCTGCAAACACATCAGAAGGGGCAATCAATTGCAAATGGAATGGTTATAATAACCAACAAAGTTTGATGGAGAAGAAAGAGATTGCATTCAACAACTATGGTTGGACACTCATGGATAATGTTAATCATGAAGCACCTTCATGTTGCACTAAACCTCTCAAGACTCTTGATCTTTTTCCACTAACAACAAGAATCAAAGACTAG 615 0.3675 MSPPGSSRWSPTTEQLMILEELYRSGIRTPSAVQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQQQQHQQQQLQVHHCQLNHNNMISNHFVGGTFGYPFGSNSHDFSFFNSPSLLFEGSVAANTSEGAINCKWNGYNNQQSLMEKKEIAFNNYGWTLMDNVNHEAPSCCTKPLKTLDLFPLTTRIKD 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01541 204 Coils Coil 69 89 - -
Mepo3g01541 204 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 200 IPR044555 GO:0003700|GO:0099402
Mepo3g01541 204 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Mepo3g01541 204 SMART HOX_1 4 71 IPR001356 GO:0003677
Mepo3g01541 204 FunFam WUSCHEL-related homeobox 4 6 73 - -
Mepo3g01541 204 SUPERFAMILY Homeodomain-like 7 67 IPR009057 -
Mepo3g01541 204 CDD homeodomain 8 67 IPR001356 GO:0003677
Mepo3g01541 204 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Mepo3g01541 204 Gene3D - 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01541 Mepo-Chr3 22854894 22856177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01541 1 200 Wox Gene Family AT2G28610 42.308 1.72e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mepo3g01541 Homeodomain 1.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01541 - - gmx:102663963 248.44