Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01512 ATGGAGTGTGGTTTAGATCTGCATGCAAAGTTGGTGAATGAAACAGAACAAGTTGGTTTTGGAAATTTAGCAGAAGAAAATTGGCTTAATAATACTACAAATGATCAAGATGGTGATCTTTTAGGTATGAATATGAATGATGATGCATCTATGTTCTATGCTGATTTTCCTCCTTTACCTGATTTTCCATGCATGTCATCTTCATCTTCATCTTCATCATCTTCAACACCATTGAAAACCATTGCATGTACTTCAACTACAACAACTACTACCTCTTCTTCTTCCTCAGCTTCTTCTTCATCTGCAGCTTCTTGGGCTGTTTTGAAATCAGATGTTGAAGTAGATCATCAAGGTTATAGTAACATGCATCAAAAACATGGTCATCCATTAGATTATCATCATGGTCATCCTCCAACAACTTTGTCATCAACTGCTTCTATGGAGATTTCTCAACAACAGCAACAAGATCTTGGTGTTTCTAACAATGATGTTGTTGGTGGTGGTGATTGCATGGATGATGTTAACATTATGGATACTTTTGGTTACATGGAGCTTTTAGAAGCTAATGAATTTTTTGACCCTGCTTCGATTTTTCAAAATGAAGATGAAAACCCTTTAGTGGATTTCACGCAAGAGCAACAGGTTCATGTGCAAGACGGATATCAACAACAACAACAACATCAACAAGTTCCGATGATAGTGCACGATGATAGGGAAAATAAACCGCAACAAGTGAATATCGAGGAAAATAACGACGATGTTTTTGTGTGCGACGGTGTAAATGGGGAAGAGAGTATTCAAGGAGATGAATTAGGTGCATGTGATGGTGTAAGTGATGAAATGAGTATGGTTTTCTTGGAGTGGCTTAAATCGAACAAAGATAGTGTCTCGGCGAATGATTTGAGGAATGTGAAGCTTAAGAAATCGACAATCGAAAGTGCTGCTAGGAGATTAGGTGGTGGAAAAGAAGGGATGAAACAATTGTTGAAGCTTATTCTTGAATGGGTTCAAACTAGTCATCTTCAAAACAAAAGGCTCAAAGAAAACACCAACAATAACACAATAATACCTTCAAATTTTGTTCCTCAACAACAACAATTTCAAGATCCATGTCAGAACCAAAACACTGCAAACACATTTGCACCGGAATCGAACGCTTGTTTCAACCAAACATCATGGCTAGATCAAACACCTCTCATTGTACCTCCACAACAATTTTCACAACCAATGGTTGGAGTTGGAGTTGGATTTGTTGCTGATCCTTACACAAATGGTTCTGTTTCAAATAACATTAACCCGTACCAACCTGCTGCTACTAATGAATATCACATGTTGGAATCAAATCATTCATGGGGTGCTTCTCAATTCAATGTTGCACCAAACTACAATCAATCATTTGTCGAAAACAACAATAATGTGCTACAACCTCATGGTATGAATTTTGGAGGTTATGGAAATCAATATAATTCTTATCAGTTGTTTCCTGGTCCTGGTGATAGGTTGATGAGGTTAGGTCCTTCTGCTACAAAAGAAGCTCGAAAGAAGAGGATGGCTCGGCAACGGCGGTTTATGTCTCATCATAGGCATCATAATAACAACCATCATCAGAATATTCAAGGTTCTGATCCACTTGCGAGATTAGGTAGTGGTGATAATTGCACCAATGCTGCTGGTGGTGGTTCTCATGCAAATCCAGCGAACTGGATGTATTGGCAGACTATGACCGGTGGGACAGCAGCTTCCTTGGCGCCTGTTGTTCCGGCTGAACCGACGCAGCCTCCAGTGGACCGTGATCGCCCCACCATGCAGACACAGAGTTCTCACCAGGGTCGAAATGCATCCGATAGGAGACAGGGTTGGAAGCCTGAAAAGAACTTGAGGTTCCTTCTGCAAAAGGTTTTAAAGCAAAGCGATGTGGGAAGTCTGGGGAGAATTGTTTTGCCAAAAAAAGAGGCAGAAACACATTTGCCAGAATTGGAAGCAAGAGATGGAATTTCGATTACAATGGAAGACATTGGAACTTCTCGAGTTTGGAATATGCGTTATAGCATCAGATATTGGCCAAACAACAAAAGCAGGATGTACTTGCTAGAGAACACTGGTGATTTTGTGAAAGCCAATGGACTCCAAGAAGGAGATTTCATAGTCATATATTCTGATGTGAAGTGTGGCAAATTTATGATAAGGGGAGTTAAAGTGAGGCAACAAGGAACAAAACCAGAGGCAAAAAAAGCTGGAAAATCACAGAAAAACCAGCATGGGAATAATGCAGCAAATTCAGCTGGAACTGCAGTGGATAATAATGGCACGCCATCTTCACCAAAGCGAAAAAAATGA 2337 0.3997 MECGLDLHAKLVNETEQVGFGNLAEENWLNNTTNDQDGDLLGMNMNDDASMFYADFPPLPDFPCMSSSSSSSSSSTPLKTIACTSTTTTTTSSSSSASSSSAASWAVLKSDVEVDHQGYSNMHQKHGHPLDYHHGHPPTTLSSTASMEISQQQQQDLGVSNNDVVGGGDCMDDVNIMDTFGYMELLEANEFFDPASIFQNEDENPLVDFTQEQQVHVQDGYQQQQQHQQVPMIVHDDRENKPQQVNIEENNDDVFVCDGVNGEESIQGDELGACDGVSDEMSMVFLEWLKSNKDSVSANDLRNVKLKKSTIESAARRLGGGKEGMKQLLKLILEWVQTSHLQNKRLKENTNNNTIIPSNFVPQQQQFQDPCQNQNTANTFAPESNACFNQTSWLDQTPLIVPPQQFSQPMVGVGVGFVADPYTNGSVSNNINPYQPAATNEYHMLESNHSWGASQFNVAPNYNQSFVENNNNVLQPHGMNFGGYGNQYNSYQLFPGPGDRLMRLGPSATKEARKKRMARQRRFMSHHRHHNNNHHQNIQGSDPLARLGSGDNCTNAAGGGSHANPANWMYWQTMTGGTAASLAPVVPAEPTQPPVDRDRPTMQTQSSHQGRNASDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYSIRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKFMIRGVKVRQQGTKPEAKKAGKSQKNQHGNNAANSAGTAVDNNGTPSSPKRKK 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01512 778 Pfam B3 DNA binding domain 631 729 IPR003340 GO:0003677
Mepo3g01512 778 MobiDBLite consensus disorder prediction 528 549 - -
Mepo3g01512 778 CDD BfiI_C_EcoRII_N_B3 628 731 - -
Mepo3g01512 778 ProSiteProfiles B3 DNA-binding domain profile. 630 734 IPR003340 GO:0003677
Mepo3g01512 778 Gene3D - 626 748 IPR015300 -
Mepo3g01512 778 SUPERFAMILY DNA-binding pseudobarrel domain 629 727 IPR015300 -
Mepo3g01512 778 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 287 749 IPR044800 GO:0003700
Mepo3g01512 778 MobiDBLite consensus disorder prediction 584 621 - -
Mepo3g01512 778 MobiDBLite consensus disorder prediction 597 613 - -
Mepo3g01512 778 MobiDBLite consensus disorder prediction 749 771 - -
Mepo3g01512 778 MobiDBLite consensus disorder prediction 735 778 - -
Mepo3g01512 778 SMART B3_2 630 732 IPR003340 GO:0003677
Mepo3g01512 778 FunFam B3 domain-containing transcription factor FUS3 626 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01512 Mepo-Chr3 22318496 22322940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01512 19 765 B3 DNA Binding Superfamily AT3G24650 46.329 3.50e-158 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo3g01512 B3 2.4e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01512 K09287 - psat:127127675 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01512 3 22318496 22322940 Mepo3g01512 3 22318496 22322940 ECH