Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01511 ATGTCTTCTCAACCTTTCATCACAAACCACCACAATCACCATCTTCTCCTCCTCCTCTTCACACTCCTCCTCCCATTTTCCTTTGCTTCCACCAATGAAGTCACTATCTTACTTTCATGGACACACACTTCCACAAAACTCCCTTCCACTTTTTCAAACTGGAACCCTTTGGACTCAAATCCATGCAAATGGTCATTCATAACATGCTCATCACAAAACTTTGTAACTGAAATCAACATCCAAAATGTCCAACTAGCCCTTCCTTTTCTTTCAAATATCTCTTCACTTTCCAACCTTCAAAAGCTAGTCATTTCAGGTGCCAACCTCACTGGAACTGTTCCCTCTGAAATTGGTAACTGTCTTAACCTTATTACCATTGATCTTAGCTCAAATAGTCTTGTTGGTGAAATTCCTTCAACTATAGGAAACCTCAAAAATCTCCAAAGCTTGATTTTAAACTCTAACCAATTAACTGGTTCAATTCCAATTGAACTTGGTGATTGTGTTAATCTCAAAAACCTTGACATTTTTGATAATAACCTTAGTGGAAACCTTCCTATTGAACTAGGGAAACTTTCAAATCTTGAAGTTATAAGAGCTGGTGGGAACAAAGATATTGTAGGGAAGATTCCAGAAGAGTTAGGTGAATGCAAGAATTTGACTGTTTTAGGACTTGCTGACACTAAAATCTCAGGTTCATTACCTAATTCATTAGGTAAATTAACCATGCTTCAAACAATATCTATTTATAGTACTTTAGTTTCTGGTGAAATTCCTCATGAAATTGGTAACTGTTCTGAGCTTGTGAACTTGTTTTTGTATGAGAATGATCTTTCTGGTGAGATTCCTTTTGAGATAGGTAAGCTTATGAAGCTTGAAAAGATTTTGCTATGGCAAAATAGTTTTGTTGGTAGCATACCTGAGGAAATTGGAAACTGTAGTAGTTTGAAGATTCTTGATTTTTCTTTGAATTATTTCTCTGGTGGAATACCGAAAAGTTTAGGAAAATTATCGAATCTTGAAGAGCTTATGTTGAGTAACAATAATATTTCTGGTTCGATACCGGCTTCAATTTCGAATCTTACAAATTTGATACAGTTGCAGTTAGATACAAATGAGATATCAGGTTTGATTCCAGTTGAGATTGGAAAGTTGACGAAGCTAACAGTTTTTTTCGCTTGGCAGAACAAACTTGAAGGTAGAATTCCATCAGAGTTAGGAGACTGTTTAAGCCTTGAGGCTTTGGATTTGTCTTATAATTCACTCAGTGATAGTTTACCTTCAGGTCTTTTTAAGCTTCAAAATTTAACTAAGCTTTTATTGATTTCTAATGATATCTCTGGCTCTATTCCTCATGAGATTGGTAACTGTAGTTCTCTGATTCGACTCCGGCTTTTAGATAACAGAATCAGTGGTAAGATACCAAGAGAAATAGGGTTTCTTAACAACCTTAATTTCCTTGATCTTTCTGAAAATCATCTTAGTGGTTCGGTGCCGTTAGAGATTGGAAACTGTAAAGAACTTCAAATGCTGAATCTAAGTAACAACTCTCTTTCTGGAGATTTGCATAGTTTCTTGTCTTCTCTTACAATGCTAGAGGTTTTGGATGTTTCAATGAATAATTTTTCTGGTGAGGTTCCTATGAGTATTGGTCAATTAACTTCACTTCTTAGGGTTATTTTGAGCAAGAACTCTTTCTCTGGATCAATTCCTTCATCACTTGGGAAATGCTCAGGTATTCAACTTCTTGACCTTAGCAGCAACATGTTATCGGGAAGCATACCTCGAGAATTGTTTCAAATTGAAGCACTTGATATTGCTTTAAATTTGAGTCATAATGCATTATCTGGGGTAATCCCAGAAGAGATTTCGGCTCTTAACAAGTTGTCTGTTCTTGACCTTTCACATAACAATCTTGAAGGTGACTTGATGGTATTTTCAGGCCTTGAAAATCTTGTTTCTTTGAACATTTCATACAACAAATTCACTGGTTATTTACCTGATAGCAAGTTGTTTCATCAACTAGCAGCAACAGATTTAGTTGGAAATCAAGGTTTGTGTCCTAATGGTCATGATTCATGTTTCATTGGAAATGCTGCAATGACAAGGATGTTAAATGGCTCTAATTCTAAGAGGTCAGAGATAATTAAAGTGGCCATTGGATTGCTGAGTTCTTTGACTGTTGTAATGGCAATCTTTGGAGTTGTTACGGTCTTTCGAGCGAGGAAACTCGTTCGAGACGACAATGATTCTGAGATGGGAGGAGGAGGAGGCGATTCATGGCCTTGGCAGTTCACACCATTCCAAAAGGTAAACTTTTGTGTGGAGCAAATCCTAAAATGTTTGGTGGAATCCAATGTAATTGGAAAAGGGTGTTCGGGGATCGTTTATCGTGCAGAAATGGAAAACGGCGATGTCATTGCTGTCAAAAGGCTGTGGCCAACAACAACGGCAGCCACTGCCACTACTGCAAGATATGATCATAGTCAAAGTGACAAGTTAGCAGTTAATGGAGGAGTTCGCGATTCCTTTTCAGCCGAGGTAAAAACTCTCGGTTCAATTCGCCACAAGAACATTGTTAGGTTCTTAGGATGCTGCTGGAACAGAAACACAAGGCTTCTTATGTATGATTACATGCCAAATGGGAGTCTTGGAAGTTTACTTCATGAAGGAAGTGGTAATTGCTTGGAGTGGAACATTAGATTCAAGATAATACTAGGAGCAGCTCAAGGTGTGGCTTATTTACACCATGATTGTGCTCCTCCTATCGTTCATAGAGATATTAAGGCCAACAACATCCTCATAGGTCTTGAATTTGAACCATACATAGCTGATTTTGGACTTGCAAAACTTGTTGACGATGGAGATTTTGCACGATCTTCAAGTACACTAGCTGGTTCTTATGGTTACATAGCTCCTGAGTATGGATACATGATGAAGATAACCGAGAAAAGTGACGTATACAGCTATGGTATTGTTGTATTAGAAGTACTAACAGGTAAACAACCAATTGATCCAACAATACCTGATGGACTTCACATTGTTGATTGGGTTAGACAAAAAAGAGGTGGAATTGAAGTGCTAGATGAAAGCTTAAGAGCAAGGCCAGAATCTGAAATCGAAGAAATGTTGCAGACTTTAGGTGTTGCTTTGTTATGTGTAACTCCAAGTCCAGATGATAGACCAACAATGAAAGATGTGGTTGCAATGATGAAAGAGATTAAACAGGAGAGAGATGAATGTGTGAAAGTTTTCGATGGATCTTCTACAAATGATAGCCATGAAACTAATCGTTCCAACGAAGAACAAGTCGAAGGGATGAAACATTCATGTCCAACATCAAGCAGCAGCAGCAACACAAATTTGAAATTGCATTACTCTCCTAATAGTTCTACAACACTAAAGTAA 3408 0.3759 MSSQPFITNHHNHHLLLLLFTLLLPFSFASTNEVTILLSWTHTSTKLPSTFSNWNPLDSNPCKWSFITCSSQNFVTEINIQNVQLALPFLSNISSLSNLQKLVISGANLTGTVPSEIGNCLNLITIDLSSNSLVGEIPSTIGNLKNLQSLILNSNQLTGSIPIELGDCVNLKNLDIFDNNLSGNLPIELGKLSNLEVIRAGGNKDIVGKIPEELGECKNLTVLGLADTKISGSLPNSLGKLTMLQTISIYSTLVSGEIPHEIGNCSELVNLFLYENDLSGEIPFEIGKLMKLEKILLWQNSFVGSIPEEIGNCSSLKILDFSLNYFSGGIPKSLGKLSNLEELMLSNNNISGSIPASISNLTNLIQLQLDTNEISGLIPVEIGKLTKLTVFFAWQNKLEGRIPSELGDCLSLEALDLSYNSLSDSLPSGLFKLQNLTKLLLISNDISGSIPHEIGNCSSLIRLRLLDNRISGKIPREIGFLNNLNFLDLSENHLSGSVPLEIGNCKELQMLNLSNNSLSGDLHSFLSSLTMLEVLDVSMNNFSGEVPMSIGQLTSLLRVILSKNSFSGSIPSSLGKCSGIQLLDLSSNMLSGSIPRELFQIEALDIALNLSHNALSGVIPEEISALNKLSVLDLSHNNLEGDLMVFSGLENLVSLNISYNKFTGYLPDSKLFHQLAATDLVGNQGLCPNGHDSCFIGNAAMTRMLNGSNSKRSEIIKVAIGLLSSLTVVMAIFGVVTVFRARKLVRDDNDSEMGGGGGDSWPWQFTPFQKVNFCVEQILKCLVESNVIGKGCSGIVYRAEMENGDVIAVKRLWPTTTAATATTARYDHSQSDKLAVNGGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHEGSGNCLEWNIRFKIILGAAQGVAYLHHDCAPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGLHIVDWVRQKRGGIEVLDESLRARPESEIEEMLQTLGVALLCVTPSPDDRPTMKDVVAMMKEIKQERDECVKVFDGSSTNDSHETNRSNEEQVEGMKHSCPTSSSSSNTNLKLHYSPNSSTTLK 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01511 1135 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 469 1076 - -
Mepo3g01511 1135 SUPERFAMILY RNI-like 256 601 - -
Mepo3g01511 1135 FunFam Nuclear pore complex protein NUP107 30 185 - -
Mepo3g01511 1135 PRINTS Leucine-rich repeat signature 626 639 - -
Mepo3g01511 1135 PRINTS Leucine-rich repeat signature 484 497 - -
Mepo3g01511 1135 MobiDBLite consensus disorder prediction 1106 1135 - -
Mepo3g01511 1135 Gene3D Phosphorylase Kinase; domain 1 768 878 - -
Mepo3g01511 1135 Gene3D Transferase(Phosphotransferase) domain 1 879 1095 - -
Mepo3g01511 1135 ProSiteProfiles Protein kinase domain profile. 782 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01511 1135 Gene3D Ribonuclease Inhibitor 329 425 IPR032675 -
Mepo3g01511 1135 Gene3D Ribonuclease Inhibitor 426 521 IPR032675 -
Mepo3g01511 1135 Gene3D Ribonuclease Inhibitor 607 695 IPR032675 -
Mepo3g01511 1135 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Mepo3g01511 1135 SUPERFAMILY Protein kinase-like (PK-like) 764 1071 IPR011009 -
Mepo3g01511 1135 SMART LRR_typ_2 481 505 IPR003591 -
Mepo3g01511 1135 SMART LRR_typ_2 96 120 IPR003591 -
Mepo3g01511 1135 SMART LRR_typ_2 337 361 IPR003591 -
Mepo3g01511 1135 SMART LRR_typ_2 409 433 IPR003591 -
Mepo3g01511 1135 SMART LRR_typ_2 649 674 IPR003591 -
Mepo3g01511 1135 SMART LRR_typ_2 144 168 IPR003591 -
Mepo3g01511 1135 SMART LRR_typ_2 553 577 IPR003591 -
Mepo3g01511 1135 SMART LRR_typ_2 626 648 IPR003591 -
Mepo3g01511 1135 SUPERFAMILY L domain-like 29 303 - -
Mepo3g01511 1135 FunFam Predicted protein 186 284 - -
Mepo3g01511 1135 ProSitePatterns Protein kinases ATP-binding region signature. 788 810 IPR017441 GO:0005524
Mepo3g01511 1135 MobiDBLite consensus disorder prediction 1085 1135 - -
Mepo3g01511 1135 SMART serkin_6 782 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01511 1135 Gene3D Ribonuclease Inhibitor 187 328 IPR032675 -
Mepo3g01511 1135 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 285 393 - -
Mepo3g01511 1135 ProSiteProfiles Leucine-rich repeat profile. 628 650 IPR001611 GO:0005515
Mepo3g01511 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Mepo3g01511 1135 Gene3D Ribonuclease Inhibitor 30 186 IPR032675 -
Mepo3g01511 1135 Gene3D Ribonuclease Inhibitor 522 606 IPR032675 -
Mepo3g01511 1135 Pfam Leucine Rich Repeat 339 361 IPR001611 GO:0005515
Mepo3g01511 1135 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 879 1088 - -
Mepo3g01511 1135 ProSiteProfiles Leucine-rich repeat profile. 339 362 IPR001611 GO:0005515
Mepo3g01511 1135 SMART LRR_sd22_2 337 363 - -
Mepo3g01511 1135 SMART LRR_sd22_2 168 197 - -
Mepo3g01511 1135 SMART LRR_sd22_2 626 651 - -
Mepo3g01511 1135 SMART LRR_sd22_2 144 165 - -
Mepo3g01511 1135 Pfam Protein tyrosine and serine/threonine kinase 786 1069 IPR001245 GO:0004672|GO:0006468
Mepo3g01511 1135 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 765 878 - -
Mepo3g01511 1135 SUPERFAMILY Outer arm dynein light chain 1 548 707 - -
Mepo3g01511 1135 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 411 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01511 Mepo-Chr3 22303222 22307069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01511 28 1076 Receptor kinase-like Gene Family AT5G56040 47.467 0.0 948
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g01511 PK_Tyr_Ser-Thr 3.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01511 - - gmx:100815339 1758.81