Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01505 ATGGTAGTGATAGAGCAAGAGAACACCGACGATCGAAACGCGATTCCATCCAACGCCACTGCCGCCGGCAACGACGCTTCCGACGGCTTCGAAACCGCCAGCGAAGCTGATCTCGACAGCGACGCTGACGACGGTGGAGATATCAGCCGAGAAGAACCGAAGAATCTTGACCAACCGAAGGAGCAAGAGGGAGAACAGGAACAAGATGTTGCTCAGAGAAGTGGTTCATCTGAGAATGCTTTGATCAATGAAGAGGAATTGAAACAGAAAGCATTGAGTGAAGCAAATGAAGCAAAAGTAGAAGGTAACAAACTTTTTATAGATGGGAAGTATGAGGAGGCTTTATTGCAATATGAACATGCTTTACAGATTGCACTAGACATGTCTTCATCCGAGGAAATACGCTCAATATGCCATGCAAACCGTGCTGTGTGCTTTTTGAAACTGGGAAAATATGAAAATACAATTAAAGAATGCACTAAAGCATTGGAACTGAATCCTGCATATGTTAAAGCTTTGGTGAGAAGAGGAGAGGCTCATGAAAAGCTTGAACATTTTGAAGAGGCAATTGCTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGGTCAAGCTGGGAAATCCATTCGCCGACTAGAGCCCCTTGCTGCTGTAAAACGGGAAAAAATGAAAGAAGAAATGATGGAAAAATTGAAAGAAATGGGCAATTCTGTATTGGGACGCTTTGGGATGAGCCTTGACAACTTCAAAGCAGTCAAAGATCCAAACACTGGTTCCTATTCTATCTCAATGGAACGCTAA 804 0.4303 MVVIEQENTDDRNAIPSNATAAGNDASDGFETASEADLDSDADDGGDISREEPKNLDQPKEQEGEQEQDVAQRSGSSENALINEEELKQKALSEANEAKVEGNKLFIDGKYEEALLQYEHALQIALDMSSSEEIRSICHANRAVCFLKLGKYENTIKECTKALELNPAYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNGQAGKSIRRLEPLAAVKREKMKEEMMEKLKEMGNSVLGRFGMSLDNFKAVKDPNTGSYSISMER 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01505 267 Coils Coil 81 101 - -
Mepo3g01505 267 Pfam Tetratricopeptide repeat 138 168 IPR001440 GO:0005515
Mepo3g01505 267 MobiDBLite consensus disorder prediction 10 27 - -
Mepo3g01505 267 MobiDBLite consensus disorder prediction 1 81 - -
Mepo3g01505 267 Pfam Tetratricopeptide repeat 171 203 IPR013105 -
Mepo3g01505 267 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 1 266 - -
Mepo3g01505 267 Gene3D Tetratricopeptide repeat domain 84 230 IPR011990 GO:0005515
Mepo3g01505 267 ProSiteProfiles TPR repeat profile. 170 203 IPR019734 GO:0005515
Mepo3g01505 267 SMART tpr_5 95 128 IPR019734 GO:0005515
Mepo3g01505 267 SMART tpr_5 170 203 IPR019734 GO:0005515
Mepo3g01505 267 SMART tpr_5 136 169 IPR019734 GO:0005515
Mepo3g01505 267 MobiDBLite consensus disorder prediction 47 68 - -
Mepo3g01505 267 SUPERFAMILY TPR-like 93 208 IPR011990 GO:0005515
Mepo3g01505 267 ProSiteProfiles TPR repeat profile. 136 169 IPR019734 GO:0005515
Mepo3g01505 267 MobiDBLite consensus disorder prediction 32 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01505 Mepo-Chr3 22182538 22187222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01505 95 237 Calmodulin-binding Proteins AT3G25230 41.060 1.32e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01505 K24926 - gmx:100808386 342.813