Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01503 ATGGCTGAAGAGGAACAACCAAAGGATCTCAACTATATTCCAGAGGTTATATTGAAGAAGAGGAAACACAGTGAAGCATGGGCCTTGAGTAAAAAGGCGCAACTCCAGAAAAAAAGTTTCCAGCTCAGGAAGTCCAAGGACTTCATAAAAAAGCCCGAGGATTTCATTTTTGAATATCGCAACAGGGAGATTGACCTTATTAGAATGAAACGAAGGGTCAAGTGGAGACGTGGAGATAAATCGAGGCCAAGCAACAAGCCCATAATAGTCATTCGTATACAGGGGAAACAAGACATGCATGCTACAACCAGAAAGCACTTGTTCAGTTTGGGATTGAGAAGAATATTCAGTGCTGTCTTTGTAAAGCCAACTGATGGAGTAATGGCCAAGTTGGCGAGAGTTGAACCATATGTCACCTATGGATATGCAAATCTTAAAACCATAAAGGAGCTGATTTACAAGAAGGGACATGCAAAATTAGATAAGCGAAAAGTTCCTTTGACAGACAATAACCTTATTGAGCAGGAATTGGGAAAGTTTGGTATTGTATGCATAGAAGACATTGTGCATCAAATTGACAATGTTGGTCCACACTTTAAGGAAGTTGTCCGATTTATGTGGCCCTTTGAACTGAACAAGCCAGCAGATGGATTAAAAGGATTGAAAAACCGATACAAGGATGGTGGAGATTCAGGGGACCGTGAGGATCTCATCAATGAGCTCATCAATAAAATGAATTGA 741 0.4049 MAEEEQPKDLNYIPEVILKKRKHSEAWALSKKAQLQKKSFQLRKSKDFIKKPEDFIFEYRNREIDLIRMKRRVKWRRGDKSRPSNKPIIVIRIQGKQDMHATTRKHLFSLGLRRIFSAVFVKPTDGVMAKLARVEPYVTYGYANLKTIKELIYKKGHAKLDKRKVPLTDNNLIEQELGKFGIVCIEDIVHQIDNVGPHFKEVVRFMWPFELNKPADGLKGLKNRYKDGGDSGDREDLINELINKMN 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01503 246 Pfam Ribosomal L30 N-terminal domain 13 74 IPR012988 -
Mepo3g01503 246 PANTHER 60S RIBOSOMAL PROTEIN L7 10 246 IPR039699 -
Mepo3g01503 246 FunFam 60S ribosomal protein L7 88 193 - -
Mepo3g01503 246 CDD Ribosomal_L7_archeal_euk 88 246 IPR035808 -
Mepo3g01503 246 Gene3D - 88 191 IPR036919 -
Mepo3g01503 246 Gene3D - 192 246 IPR036919 -
Mepo3g01503 246 SUPERFAMILY Ribosomal protein L30p/L7e 89 246 IPR036919 -
Mepo3g01503 246 NCBIfam 60S ribosomal protein uL30 14 246 IPR005998 GO:0000463|GO:0003735|GO:0022625
Mepo3g01503 246 Pfam Ribosomal protein L30p/L7e 89 138 IPR016082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01503 Mepo-Chr3 22161443 22165818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01503 1 246 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 50.806 9.75e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01503 K02937 - gmx:100306107 355.14