Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01478 ATGAGTTGCTTTTCATGTTTCTCGTCCCAAGAAAAGAAAGTATCAAAGAGGCCTAACAATAACAATAACAATAACAATGGAAAGAGGATACAACATCATCCTACTCAAATAACTCCTCAGAAAGCATCTCAACCTCAGCCAGAGAATCATTATCAAAAGGCAAGGGCAAACCCACCAACAGAACCTAAAATAAATAAAGAGACCAACAAAGATAATGGTCACAACATTGGTGCACAAACGTTCACCTTCAGGGAATTGGCTGCAATCACAAGAAATTTTAGGCAGGAAAATTTAATAGGTGAAGGTGGATTTGGAAGAGTTTATAAAGGAAGACTTGAAAAAACCAACCAGGAAGTAGCTGTGAAGCAACTTGACAGGAATGGATTGCAAGGAAACCGAGAGTTTCTTGTTGAAGTGTTGATGTTGAGCCTTTTACATCATAAAAATCTAGTTAATCTAATTGGATATTGTGCTGATGGAGATCAAAGACTATTGGTATATGAGTTCATGTCATTAGGATCTCTTGAGGATCATCTACTTGATCTTGAACCACAACAAAAGCCATTAGATTGGTTCACAAGAATGAAAATAGCATTGGATGCTGCAAAAGGACTAGAATATTTGCATGACAAGGCCAATCCACCTGTCATATACCGTGACTTAAAATCTTCCAACATCTTATTGGACAAAGATTTCAATGCAAAACTCTCTGATTTTGGACTAGCAAAGCTGGGACCTACAGGGGATATGTCTCATGTTTCTTCAAGAGTAATGGGGACTTATGGATATTGTGCACCTGAGTATCAAAGAACAGGTCAACTCACTGTGAAATCAGATATATACAGTTATGGTGTTGTTTTACTTGAATTGATCACTGGAAGGAGAACCATTGATAACACAAGACCATCAAGGGAGCAAAATCTTGTTTCTTGGTCATATCCAGTATTCAAGGACCCACAAAGATATCCAGAATTAGCAGATCCAAAACTTGAAGGAAACTTTCCAATGAGATCATTACATCAAGCAGTGGCAGTAGCAGCTATGTGTCTAAATGAAGAACCATCAGTGAGACCATTGATAAGTGATGTAGTAACAGCACTTAGTTTCCTTGGAATAGATCCAATGAATCAAGATCCACAAGTTTTGTCACCAATTGACATGCCATCACCAACACAAAAGAATGAAGAAAGTAGTGCAACCTTGAGTCTTCTCGACGATGATAGTGCCTTTGAACGCCAAAAAGCCGTTGATGAAGCCATGGAATGGGGTTCAAATACTAGAAATAAACCTTCATCTTTGTAA 1302 0.3802 MSCFSCFSSQEKKVSKRPNNNNNNNNGKRIQHHPTQITPQKASQPQPENHYQKARANPPTEPKINKETNKDNGHNIGAQTFTFRELAAITRNFRQENLIGEGGFGRVYKGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHKNLVNLIGYCADGDQRLLVYEFMSLGSLEDHLLDLEPQQKPLDWFTRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDKDFNAKLSDFGLAKLGPTGDMSHVSSRVMGTYGYCAPEYQRTGQLTVKSDIYSYGVVLLELITGRRTIDNTRPSREQNLVSWSYPVFKDPQRYPELADPKLEGNFPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGIDPMNQDPQVLSPIDMPSPTQKNEESSATLSLLDDDSAFERQKAVDEAMEWGSNTRNKPSSL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01478 433 Pfam Protein kinase domain 94 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01478 433 SUPERFAMILY Protein kinase-like (PK-like) 79 398 IPR011009 -
Mepo3g01478 433 MobiDBLite consensus disorder prediction 1 53 - -
Mepo3g01478 433 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Mepo3g01478 433 SMART serkin_6 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01478 433 CDD STKc_IRAK 99 367 - -
Mepo3g01478 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Mepo3g01478 433 MobiDBLite consensus disorder prediction 1 76 - -
Mepo3g01478 433 PANTHER OS07G0668900 PROTEIN 3 376 - -
Mepo3g01478 433 MobiDBLite consensus disorder prediction 382 404 - -
Mepo3g01478 433 FunFam Serine/threonine-protein kinase PBS1 65 169 - -
Mepo3g01478 433 Gene3D Phosphorylase Kinase; domain 1 78 169 - -
Mepo3g01478 433 ProSiteProfiles Protein kinase domain profile. 93 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01478 433 Gene3D Transferase(Phosphotransferase) domain 1 170 377 - -
Mepo3g01478 433 MobiDBLite consensus disorder prediction 380 433 - -
Mepo3g01478 433 FunFam Serine/threonine-protein kinase PBS1 170 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01478 Mepo-Chr3 21870105 21873019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01478 1 427 Glycoside Hydrolase AT3G07070 66.051 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo3g01478 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01478 - - psat:127127708 717.227