Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01471 ATGGCAAGCCTTTACTGGTCACGCCAAAAGACTTATGCAGACCAACACGGCTACCATCTAGCGGAATTAGGGTTTAGAAAATACAGTTACTTAGAGCTAAAGAAAGCAACAAAAGGGTTCAGCCAAGAGATTGGAAGAGGTGGAGGAGGTGTTGTATACAAAGGCATATTATCTGATGGAAGACATGCTGCAATAAAGAGACTTTACAATGCACAACAAGGAGAAGGTGAATTTCTAGCCGAAGTAGGAATCATTGGAAGGCTTAATCACATGAATTTGATCAAAATGTGGGGATATTGTGCCGAGGGAAAATATAGACTATTGGTTTATGAGTACATGGAAAATGGTTCTTTAGCCGAAAATTTGTCGGCTAATAAACTTGATTGGAGTAAAAGGTACAAAATTGCTTTATCAATAGCAAGAGTTTTAGCATATCTACATGAAGAATGTTTGGAGTGGATTTTACATTGTGATATAAAGCCGCAAAATATACTTCTTGATTCTAACTTCGAACCCAAGTTAGCCGATTTTGGATTGTCTAAGCTACAAAACAGAAACAATCTCAACAATTCAAGTGTATCTATGATTAGAGGAACAAGAGGGTATATGGCACCTGAATGGATTTTCAATTTGCCAATAACATCTAAGGTGGATGTTTATAGTTATGGAATTGTTGTATTGGAAATGATAACTGGAAAAAGTCCAAGTGCAGGTTTCAAGATTGTTAATGGAGAAGAGGAAAGTGATGGAAGGTTGGTTACATGGGTGAGAGAAAAAAGAGGCAGTAACATTTCTAGGTTGGAGGAAATTGTTGACCCTCAAATTGGATTAGATTATGATAAAAGTAAAATGGAGATTATGGCTAAAGTTGCTTTGGATTGTGTTGTGGATGAAAGAGATTCAAGGCCTACCATGAGTAGAGTAGTTGAGATGCTTCAATACCATGGAAGTGATATTTAG 960 0.3698 MASLYWSRQKTYADQHGYHLAELGFRKYSYLELKKATKGFSQEIGRGGGGVVYKGILSDGRHAAIKRLYNAQQGEGEFLAEVGIIGRLNHMNLIKMWGYCAEGKYRLLVYEYMENGSLAENLSANKLDWSKRYKIALSIARVLAYLHEECLEWILHCDIKPQNILLDSNFEPKLADFGLSKLQNRNNLNNSSVSMIRGTRGYMAPEWIFNLPITSKVDVYSYGIVVLEMITGKSPSAGFKIVNGEEESDGRLVTWVREKRGSNISRLEEIVDPQIGLDYDKSKMEIMAKVALDCVVDERDSRPTMSRVVEMLQYHGSDI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01471 319 FunFam Putative receptor-like protein kinase 113 318 - -
Mepo3g01471 319 ProSiteProfiles Protein kinase domain profile. 38 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01471 319 Gene3D Transferase(Phosphotransferase) domain 1 113 318 - -
Mepo3g01471 319 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Mepo3g01471 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Mepo3g01471 319 Gene3D Phosphorylase Kinase; domain 1 3 112 - -
Mepo3g01471 319 SUPERFAMILY Protein kinase-like (PK-like) 17 313 IPR011009 -
Mepo3g01471 319 FunFam S-receptor-like serine/threonine-protein kinase 7 112 - -
Mepo3g01471 319 Pfam Protein kinase domain 41 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01471 319 SMART serkin_6 38 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01471 319 CDD STKc_IRAK 44 313 - -
Mepo3g01471 319 PANTHER OS07G0415500 PROTEIN 9 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01471 Mepo-Chr3 21767787 21769386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01471 28 312 Trihelix Transcription Factor Family AT5G38560 43.003 2.20e-71 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo3g01471 Pkinase 9.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01471 - - mtr:11433991 580.096