Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01441 ATGTCTCTTTCAAGAGCCAAAGATGCTGAGATGAAGGAAGCTGCAACAACAGGAGCACCTTCATCTTCATCTTCTTCATGGAATAGGCTGCCTCCTATGCCTCCTCATAGATTTGAAGATAGCGATGAAGATCTATTCGAAGTTCCGGATGTGGAAGGTACACAATGTCAAAGTGTCCATTCTGAGTTAACAAATCAAAACAGTAACCACAATCAAAGCAATGTAACCGATGCTCAACTTCAAGCAGGCTTCCCCGGAAAGCGCCGCCGCGGAAGAAACCCTGCAGACAAGGAACATAGACGTCTCAAAAGGTTGCTAAGGAATAGGGTCTCGGCCCAACAAGCCCGTGAAAGAAAAAAAGTGTATGTAAATGACTTAGAATCAAGAGCTAAAGAGTTTGAAGATAAGAACTCCAATTTAGAAGAACGTATCTCAACTTTGACCAATGAGAACGCCATGCTCCGAAAGGTTCTTATGAACACTAGACCCAAAGTTGATGAGAGCAATGAAGGTTAG 516 0.4322 MSLSRAKDAEMKEAATTGAPSSSSSSWNRLPPMPPHRFEDSDEDLFEVPDVEGTQCQSVHSELTNQNSNHNQSNVTDAQLQAGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKEFEDKNSNLEERISTLTNENAMLRKVLMNTRPKVDESNEG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01441 171 SUPERFAMILY Leucine zipper domain 100 159 IPR046347 GO:0003700|GO:0006355
Mepo3g01441 171 Coils Coil 123 157 - -
Mepo3g01441 171 MobiDBLite consensus disorder prediction 54 80 - -
Mepo3g01441 171 Gene3D Single helix bin 119 160 - -
Mepo3g01441 171 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 103 118 IPR004827 GO:0003700|GO:0006355
Mepo3g01441 171 CDD bZIP_HY5-like 110 152 - -
Mepo3g01441 171 MobiDBLite consensus disorder prediction 1 100 - -
Mepo3g01441 171 Pfam bZIP transcription factor 97 156 IPR004827 GO:0003700|GO:0006355
Mepo3g01441 171 SMART brlzneu 96 160 IPR004827 GO:0003700|GO:0006355
Mepo3g01441 171 MobiDBLite consensus disorder prediction 16 30 - -
Mepo3g01441 171 FunFam Transcription factor HY5 119 160 - -
Mepo3g01441 171 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 13 168 IPR044280 GO:0000981|GO:0045944
Mepo3g01441 171 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 98 161 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01441 Mepo-Chr3 21375389 21377682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01441 79 167 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 74.444 8.56e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo3g01441 bZIP_1 2.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01441 K16241 - gmx:100783826 216.083