LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g01440	ATGGATTCAAGTGATTCATGGACTATCTTCTTTCTTCTTCATAGCTTCTTGGTTATTGCTTTCTCTAAACAAGATGGTTTCTTGAGTCTATCATGTGGTGGAACAACAAGCTTCGATGATTCATCAAACATTTCATGGTCCTCAGACACTCCTTACATAACCACAGGAAAGACAGCCACCATCAATTACAATGATGGTTCCTTGTCAACAAATGTCTCGGCTCGGTTCTTCCCTCATTCCAAACATCGTGCATGCTATCGGATACCAATGAACAATGCCACTAGTTTGATTCTTGTTAGAGCAAAATTTGTGTACAAGAACTATGATGGACTTGGAAAACCACCTATTTTCTATGTTTCTCTTGGGACAGCTATTGCAGCTAAGATAAATCTAGCTAAAAATGATCCATGGATAGAAGAGTTTCTATGGGAAGTCAATAAGGATACACTTGCATTCTGTTTGAATTCAATTCCAAGAGGTGGTTCTCCTATAATTTCTTTACTTGAAATTAGACCTCTTCCTAAAGGTTCCTACACAAAGGGCAAGGAAGATTTTCCTAATAAATTACTTAGGATGAGTTATAGAATTGATTGTGGACACATCAATGATTCTATAAGGTACCCTATGGATCCATATGACAGAATATGGAACAGTGATAGAAGTTTCATACCTTTTCATGCTACAAGTGGGTTTAAGATCAAGAATAGCTTCAATCAATCCAATATTTTAGAGAAACCACCAGCTTCTGTTCTTCAAACTGGAAGAGTCTTGGCACGACGAAATATAATGGCGTATAACCTACCTCTTGAGGGGTTAGGGGACTACTATATTATCCTCTATTTTGCTGGAATTCTTCCTGTTTTCCCTTCATTTGACGTATTCATAAATGGAGATCTTGTAAAGTCAAACTATACGATAAAAAGATCAGAAATCAGTGCTTTATATGTTACCCGAAAGAGGATCAGCAGCTTGAATATAACACTGAGAAGTATCAACTTTTACACTCAGATCAATGCATTTGAGGTATATAATATGGTTGATATTCCACCTGAAGCCTCCTCAACAACAGTTTCAGCAATGCAGGTTATTCAGCAGTCCACTGGCTTGGATCTAGGATGGCAAGATGATCCATGCTCTCCTTTCCCATGGGATCACATAGATTGTGAAGGAAACTTAGTTATATCATTGGCTCTCTCAGACATAAATTTGAGATCAATTAGTCCTACATTTGGTGACTTGTTGGACCTTAAAACATTGGATTTGCACAACACATCACTTGCTGGTGAAATCCAGAATTTGGGTAGCTTGCAAAGCCTTGCAAAACTGAACCTTAGTTTCAATCAGCTGACATCCTTTGGTGAAGAGCTGGAGAACTTGATTAGTCTTCAAATTTTAGACTTGCGAGATAATAGTCTCCGAGGAGTAGTGCCAGATAACTTGGGAGAGTTAGAAGACCTCCACTTACTGAATCTAGAAAACAACAAACTACAAGGACCACTTCCAGAGTCTTTGAACAAAGACACTATAGAGATCAGAACATCTGGAAATTTGTGTCTTACTTTTTCCACAACCACGTGCGATGATGCATCATCCGATCCTCCAGTTGTGGCACCACAATTGATTATAATTCCCAAAAGGAAGCACCATGGACAAAACCATCTAGTAATAATACTAGGCACAGTTGGAGGAGCTACACTTACCATTTTCCTGATATGTATTTCAGTATATATATACAATTCTAAAATAAGATATCAAGCCGCACACACAACTAGGGAAGAAACTGATATGAGGAACTGGGGTGCAGAAAAAGTTTTTACCTACAAAGAAATCAAAGTAGCTACTAGCAATTTTAAGGAAATCATTGGAAGAGGAGGTTTTGGATCTGTTTACCTTGGAAAGCTTCCAAATGGAAAATCAGTTGCTGTCAAAGTTCGGTTCGATAAATCCCAACTTGGGGTTGATTCCTTTATCAATGAGATTCATCTCTTGTCGAAAATCCGTCATCAAAATCTTGTGTCTTTGGAAGGATTCTGTCATGAAGCAAAGCATCAGATATTGGTTTACGAATACTTGCCTGGTGGATCCCTAGCTGATCACCTCTATGGTGCAAACAGCCATAAAAATCCCTTAAGCTGGATTCGAAGGTTGAAAATTGCTGTCGATGCAGCAAAAGGATTGGATTATTTACATAATGGAAGTGAACCAAGAATCATACACCGCGATGTCAAGTGTAGTAACATCCTCTTGGACATGGATTTGAATGCCAAGGTCTGTGATTTTGGCCTCTCTAAGCAGGTAACCAAAGCAGATGCAACTCATGTCACCACTGTTGTCAAGGGAACTGCTGGCTATCTAGATCCAGAGTATTATTCCACTCAACAGCTTACTGAGAAAAGTGATGTATATAGTGTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGATTCACTCTGGGACTCCTGATTCATTCAATTTGGTTTTATGGGCCAAACCCTATTTGCAGGCGGGTGCATTTGAAGTTGTCGATGAAAGCATACAAGGAACTTTTGATCTAGAAAGCATGAAGAAGGCGACATTCATTGCTGTGAAGTCAGTGGAAAGGGATGCATCACAGAGGCCGCCTATTGCTGAAGTATTAGCAGAGCTTAAAGAAGCTTATGATATTCAACTCAGATTTCTCGAGTCTTGTCAAAATGAAAATTGA	2715	0.3897	MDSSDSWTIFFLLHSFLVIAFSKQDGFLSLSCGGTTSFDDSSNISWSSDTPYITTGKTATINYNDGSLSTNVSARFFPHSKHRACYRIPMNNATSLILVRAKFVYKNYDGLGKPPIFYVSLGTAIAAKINLAKNDPWIEEFLWEVNKDTLAFCLNSIPRGGSPIISLLEIRPLPKGSYTKGKEDFPNKLLRMSYRIDCGHINDSIRYPMDPYDRIWNSDRSFIPFHATSGFKIKNSFNQSNILEKPPASVLQTGRVLARRNIMAYNLPLEGLGDYYIILYFAGILPVFPSFDVFINGDLVKSNYTIKRSEISALYVTRKRISSLNITLRSINFYTQINAFEVYNMVDIPPEASSTTVSAMQVIQQSTGLDLGWQDDPCSPFPWDHIDCEGNLVISLALSDINLRSISPTFGDLLDLKTLDLHNTSLAGEIQNLGSLQSLAKLNLSFNQLTSFGEELENLISLQILDLRDNSLRGVVPDNLGELEDLHLLNLENNKLQGPLPESLNKDTIEIRTSGNLCLTFSTTTCDDASSDPPVVAPQLIIIPKRKHHGQNHLVIILGTVGGATLTIFLICISVYIYNSKIRYQAAHTTREETDMRNWGAEKVFTYKEIKVATSNFKEIIGRGGFGSVYLGKLPNGKSVAVKVRFDKSQLGVDSFINEIHLLSKIRHQNLVSLEGFCHEAKHQILVYEYLPGGSLADHLYGANSHKNPLSWIRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMDLNAKVCDFGLSKQVTKADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSVGVVLLELICGREPLIHSGTPDSFNLVLWAKPYLQAGAFEVVDESIQGTFDLESMKKATFIAVKSVERDASQRPPIAEVLAELKEAYDIQLRFLESCQNEN	904

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g01440	904	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	737	749	IPR008271	GO:0004672\|GO:0006468
	Mepo3g01440	904	Gene3D	Transferase(Phosphotransferase) domain 1	691	900	-	-
	Mepo3g01440	904	Gene3D	Phosphorylase Kinase; domain 1	578	690	-	-
	Mepo3g01440	904	SUPERFAMILY	L domain-like	358	506	-	-
	Mepo3g01440	904	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	691	897	-	-
	Mepo3g01440	904	Gene3D	-	190	359	-	-
	Mepo3g01440	904	CDD	STKc_IRAK	621	888	-	-
	Mepo3g01440	904	ProSiteProfiles	Leucine-rich repeat profile.	438	460	IPR001611	GO:0005515
	Mepo3g01440	904	FunFam	serine/threonine-protein kinase PBS1-like	583	690	-	-
	Mepo3g01440	904	SMART	serkin_6	615	890	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g01440	904	ProSiteProfiles	Protein kinase domain profile.	615	897	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g01440	904	Pfam	Protein kinase domain	617	883	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g01440	904	Gene3D	Ribonuclease Inhibitor	360	528	IPR032675	-
	Mepo3g01440	904	Pfam	Malectin-like domain	30	344	IPR024788	-
	Mepo3g01440	904	Pfam	Leucine rich repeat	438	496	IPR001611	GO:0005515
	Mepo3g01440	904	ProSitePatterns	Protein kinases ATP-binding region signature.	621	643	IPR017441	GO:0005524
	Mepo3g01440	904	SUPERFAMILY	Protein kinase-like (PK-like)	596	886	IPR011009	-
	Mepo3g01440	904	PANTHER	OS07G0107800 PROTEIN-RELATED	455	890	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g01440	Mepo-Chr3	21366454	21372587	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g01440	10	899	Receptor kinase-like Gene Family	AT5G48740	62.247	0.0	1095

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Mepo3g01440		Malectin_like	8.1e-51	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g01440	-		-	aprc:113850446	1451.03