Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01426 ATGGAGCTGAACCGGGATCCTCTTAAGCTTCCTTGGGCTGAGCTTGGAATTGACATTGTTATTGAGGGAACTGGAGTGTTTGTGGATTGCCCTGGAGCCGTAAAACACATCCAAGCAGGTGCCAAGAAATTTATCATCACAGCTCCTGCAATGGGTGCTGATATTCCAACTTATGTTGTTGGACTAAATGAGCAAGACTACGGCCATGAAGTAGCCGGCGTCATAAGCAATGTTTCTTGCACCACAAACTATCTTGCTCCCTTTGTGAAGATCCTGGATGAAGAATTCGATACTGGTTGTATGTCTGCAGCATTTTACCCTGCTATTTTGCCTTATGCTGAAACCTTCTTTCATGAGGCTGTTGGGTCATCAACCGTTATGCGACAAAACAAGACGTACTTTGATGGTGGCACTCCTTTCACCCTTGAAATCCAAGTAGAACAGTTTAATCAGTTCAAATCACGCACTGGGAAGTTTTTCGCACAAGAAAATAAAACTTCATACATAAGACACTTTCCGGGACCAGAGGACTTTGCGAAAGCAATCTTCACTCTTGATATTGGTCAAAATGATATTGCTGATGTTATTAGTAACGTGGGAAAGGAAGATTCCCAAGCATTGATCTCAAACATTGTGGATTATTTTTCTAAACAAATTCAACTCCTGATAGTAGTTCTAGTTCTAACCTTCTATTGGAAGAGTCTACATAGTTATGGAGCAAGGACATTCTGGATACACAATACAGGACCCATTGGTTGCCTTCCAGTGGCAATGCCCATTCACAATGCACACAACAACCAAACTCAAGTGGCTGGTTATCTTGATCAAAACGGCTGTGTAAATTCCCAGAACGACTTGGCCAAAGAGTTCAATACAAAGCTTAGAGATATAGTTGTCAAATTAAGGGCAGAGTTCCCGGATGCTTCTTTAACATATGTAGACGTGTTCTCTGCAAAGTATGAGATGATCAGTAATGCTAATAAACAAGCACCACGCCCCGCTCTGATGAAAACAAAGCCACGGAAGGAGCGGCGTTGCTGCCATCAGTCCAATCCAGATCCGTCAGTATTCCTCCCCGACGAACTTATCACCGAAATTCTATCCTGTCTTAGGGTAAAGTCTCTCATGAAGATGAAGTGTGTATGTAAGTCTTGGAAAACCCTTATCTCCGATCCTAAATTTGTCAAAATACACCTTAATAGATCATTTGCATGGAACCCATATTTCTCAATAGTCACGTACAGGAGACCCGCAGAAACCGATGATTACAGTTTCATACCCTTCTCTGTTAGTAGTTTATTAGAACACCGTAATATCACTCTTCCTCAAGATCCTTACTATCAGTTGAATGATAAGGACTGCCGTGAAGTTGTCGGTTCCTGTAATGGATTGGTTTGCTTGCTTGGTTATTCTCTAGTTGTGGATAATGCTGTTATGTGGCTCCGTTTTTGGAACCCGGCCACCAGAAAAATTTCTGATAAAATAGGATATTTGCATGCTGACAATTATAGACGGAACTCTTGGATGTTTGTGTTTGGTTATGATGATTCAACCAACACCTATAAGATTGTGGCCTTAAATTGTGAAGACTTTCTCAGAAAACCCGAGGCGAACATGAGCATTTTTAGTTTGGGTGATAATGTTTGGAGAAGTATTAAAAGTTTAACGATTGTGCCTTATCAATTAATATCACCTCATGCCAGAGTTCATGATGGTGTACATTTCAGTTGCACCGTTAACTGGTTGGCACTCTCTTTCTGTCCTAATCGTGTTTTTAAAACTATGATTGTTTCGCTTGATCTAAGTACTGAGACATACACACAGTTGATGCCCCCTCAAAGTTGTGAGAATATGTCAGTAATGTTCTCAATGAAGAAGGTAGAAGCACAGAGTTGTGGTGGTGCTTTTTCAGTATTTGATAGTAACCCAAAATGTGGTAGTAGCAAATGCAAGTGTGTATACAGTATTATTCCTTTTATAGCTGGTCATTGTGACGTTCGAAGTTCTACAGATGTGGAGACGGATGAGGAACATCCTAACTTATGTAGGTCACAATCACATTATGAATGCACGGAGAAGGGAATTGGAAACTTTTGCGCTCGTTATCTTAATCCTGATAATGAATATGGCTGGTGTTTTGCGTCTTACTCTGAGGCGGAAGAATACTTCAAGATTACTTCCAACTCTAGTGTCAACTCTACTGCTTGTGGTGTTGATTCTACTAGCTCTTCTGCTCTTACTTTTATTGATAAACTAAGCGAAGAGCTTACTTGCGCTTTTTGTTTGGGCACATGCTTTGAACCAAGTACCGCTCCTTGTGATCACAGTACCGGACGATCCTGCACCATGAACACGGTTCTCTGGAACACAACTGAACTCATTTTTCCTCGAGAGATTGAAGCAAGGAAAGATTCTGAAGGTACCATAAGGAATAGAAGTATACAACCATATCCATTAAGTAGGGGTACAACTTCAAGAAAAAATGAAGCAACACCACTAGAAAATGAAAATGACTCAAGTAAAGGGATCTGA 2532 0.408 MELNRDPLKLPWAELGIDIVIEGTGVFVDCPGAVKHIQAGAKKFIITAPAMGADIPTYVVGLNEQDYGHEVAGVISNVSCTTNYLAPFVKILDEEFDTGCMSAAFYPAILPYAETFFHEAVGSSTVMRQNKTYFDGGTPFTLEIQVEQFNQFKSRTGKFFAQENKTSYIRHFPGPEDFAKAIFTLDIGQNDIADVISNVGKEDSQALISNIVDYFSKQIQLLIVVLVLTFYWKSLHSYGARTFWIHNTGPIGCLPVAMPIHNAHNNQTQVAGYLDQNGCVNSQNDLAKEFNTKLRDIVVKLRAEFPDASLTYVDVFSAKYEMISNANKQAPRPALMKTKPRKERRCCHQSNPDPSVFLPDELITEILSCLRVKSLMKMKCVCKSWKTLISDPKFVKIHLNRSFAWNPYFSIVTYRRPAETDDYSFIPFSVSSLLEHRNITLPQDPYYQLNDKDCREVVGSCNGLVCLLGYSLVVDNAVMWLRFWNPATRKISDKIGYLHADNYRRNSWMFVFGYDDSTNTYKIVALNCEDFLRKPEANMSIFSLGDNVWRSIKSLTIVPYQLISPHARVHDGVHFSCTVNWLALSFCPNRVFKTMIVSLDLSTETYTQLMPPQSCENMSVMFSMKKVEAQSCGGAFSVFDSNPKCGSSKCKCVYSIIPFIAGHCDVRSSTDVETDEEHPNLCRSQSHYECTEKGIGNFCARYLNPDNEYGWCFASYSEAEEYFKITSNSSVNSTACGVDSTSSSALTFIDKLSEELTCAFCLGTCFEPSTAPCDHSTGRSCTMNTVLWNTTELIFPREIEARKDSEGTIRNRSIQPYPLSRGTTSRKNEATPLENENDSSKGI 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01426 843 Pfam Albumin I chain a 677 720 IPR032000 -
Mepo3g01426 843 SUPERFAMILY RING/U-box 746 785 - -
Mepo3g01426 843 Pfam F-box-like 357 392 IPR001810 GO:0005515
Mepo3g01426 843 Gene3D SGNH hydrolase 99 359 IPR036514 -
Mepo3g01426 843 SMART gp_dh_n_7 1 80 IPR020828 GO:0051287
Mepo3g01426 843 Gene3D - 1 98 - -
Mepo3g01426 843 Gene3D - 360 397 - -
Mepo3g01426 843 SMART fbox_2 358 398 IPR001810 GO:0005515
Mepo3g01426 843 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 120 347 - -
Mepo3g01426 843 ProSiteProfiles F-box domain profile. 352 397 IPR001810 GO:0005515
Mepo3g01426 843 Pfam GDSL-like Lipase/Acylhydrolase 120 321 IPR001087 GO:0016788
Mepo3g01426 843 CDD F-box_AtFBW1-like 357 394 - -
Mepo3g01426 843 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 96 IPR036291 -
Mepo3g01426 843 MobiDBLite consensus disorder prediction 810 843 - -
Mepo3g01426 843 NCBIfam F-box protein interaction domain 459 620 IPR017451 -
Mepo3g01426 843 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 36 49 IPR020831 GO:0016620
Mepo3g01426 843 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 74 92 IPR020831 GO:0016620
Mepo3g01426 843 MobiDBLite consensus disorder prediction 806 843 - -
Mepo3g01426 843 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 78 85 IPR020830 GO:0016620
Mepo3g01426 843 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 716 812 IPR013083 -
Mepo3g01426 843 SUPERFAMILY F-box domain 351 413 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01426 Mepo-Chr3 21273600 21284384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01426 176 363 Pollen Coat Proteome AT1G75930 25.789 1.73e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01426 - - mtr:11445606 315.849