Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01408 ATGGCCCGCCTGACCATGACTGGATGGAAGCAAATAGGGAATTTAAGATTTGTGAGAAAAGAATCATTTTACAATAATCAATTTATAGCTTTTCCTATTAAAGAAGTCGAACTTGTTTTGCATTGTATTGGTATAGACACCATCACATCATCCCAATTCATCAAGGACCCTGAAACTCTACTCTCCAAAGATGGTTCCTATGCCTTTGGATTCTTTAGCCCTGGAAATTCTATAAATCGCTACGCTGGTATTTGGTGGAATTCTCGTTCTACAGTCATATGGGTGGCAAACAGAAACCAACCAATAAATGATTCTAATGGGACTATCACCATATCTCAAGATGGAAATCTTGTGGTATTAAATGGACAGAAACAAGTAATTTGGTCATCAAATGTTTCCAACATAGAATCCAATACCACTTCCCAGTTTTCGGACCATGGAAACCTTGTCCTTTTGGAGAGCACAACAGGAAACACTTTATGGCAGAGTATTCAGGAACCTTCTGATTCATTACTGCCTGGTATGAAACTTTCTATCAACAAAAGGACAGGTGAGAAATCAAAACTAAGATCATGGAAAAGTCCTTCTGATCCATCTGTTGGGAGTTTCTCTTCTAGTAGTGTTGAACGCCAAAATATACTTGAAGTGTTTATTTGGAATGAAACTCAACCATATTGGCGTAGCAGCCCTTGGAATGGTGGGGTCTTTACAGGGATAGATACTATGACAATTGCATATTTTAACGGTTTCCAAGGTGGAGATGATGGAGAAGGGAATATTAATATATATTTTACTATCCCAAATGAGGAGATTTTTTTGATCTATAAGCTTAATTCACAAGGAAAATTAGAAGAAACATCTTGGAATGATGAGGAGAAAGAAGTGCAAGTTACATGGACTAGCCGAAAATCGGAGTGTGATGTTTATGGTACATGTGGGGCATTTGCAAGCTGTAGTTCATTGAACACACCAATATGCAGCTGTTTGAAAGGATTTGAACCTCGGAGCATACAGGAATGGAATAGAAACAACTGGACAGGTGGGTGTGTTAGGAGGACACCTTTGCAGTGTGAAAGGGATAACAATAAAACCACAAGTACAAAGGAAGATGGGTTTTTGAAACTGCAGATGGTTAAAGTTCCTGATTTTGCAAGTGGTATAGCTGAGACACCGGACATATGCAGAAGGTTATGCTTGGAGAATTGCTCTTGCACTGCATACTCTAACGATGCTGGGATTGGCTGTATGACTTGGACCGGGAACTTACTTGACATAGAACAACTCCAAATGGGAGGACTTGATCTATATTTTCGCGTAGCCCATGCAGAGCTTGCTAAACTGTGGTCCTCTATCAAATCAACAAGGAAAAAGAACAAGAAAGATTTCCAACTATTTAACAAAGGCGGGACATCAGATGAAAATAATAGTGACGATGTATTTGGAGGATTATCCGAAGTTAGACTACAAGAGCTATTACTATTTGATTTTGGAAAGCTTGCAATTGCCACAAACAATTTCCACTTGTCCAACAAACTTGGACAGGGTGGTTTCGGTCCCGTCTACAAGGGGAAACTGCAAGATGGTCGAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGCCAAGGGCTAGAAGAATTCGTGAATGAAGTAGTGGTCCTTTGTAAGCTTCAACACCGTAATCTTGTAAGACTTCTTGGCTGTTGTATTGACGGTGATGAAAAGATGTTGATGTATGAGTACATGCCAAACAAAAGTTTGGATGCATTTATCTTCGATCTATCGAAAAATAAACTACTAGATTGGAGGACAAGGTATAGCATTATAGAAGGAATAGCTCGAGGATTGTTGTATCTTCACAGAGATTCCCGGCTCAGAATTATACACAGAGATTTGAAGGCAAGTAACATCTTGTTAGATGAGGAGTTTAATCCAAAAGTTTCTGACTTTGGAATGGCTAGAATATTTGGTGGCAGAGAAGATCAGGCCAATACTACTAGGGTTGTCGGAACTTATGGTTATATGTCTCCCGAATACGCAATGCAAGGACTTTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTAATACTAGAGATTCTTACTGGGAGAAGAAACTCAAGCTTATACAACAATGAGTCTCTGAGTCTTTTAGGATTTGTATGGATACAATGGAGGGAAGAAAATATTTTATCCTTAATAGATCCAGAAATATATGATCATAGTCATCACAAGAATATTTCGAGATGCATACATATAGGACTGTTATGTGTACAAGAATCAGCTGTAGACAGGCCTAATATGGCTACAGTAATTTCTATGCTTAACAGTGAGGTTGCATCACTTCCACCTCCAAGTCAACCTGCATTCATCCTGATGCGGAATATGTTGAATTCAAGGTCACCTGAAGAAAATCAAAGTATATGTTCCATTAATACTGCCGGTATTACAGACATATGTGGAAGATAG 2472 0.3871 MARLTMTGWKQIGNLRFVRKESFYNNQFIAFPIKEVELVLHCIGIDTITSSQFIKDPETLLSKDGSYAFGFFSPGNSINRYAGIWWNSRSTVIWVANRNQPINDSNGTITISQDGNLVVLNGQKQVIWSSNVSNIESNTTSQFSDHGNLVLLESTTGNTLWQSIQEPSDSLLPGMKLSINKRTGEKSKLRSWKSPSDPSVGSFSSSSVERQNILEVFIWNETQPYWRSSPWNGGVFTGIDTMTIAYFNGFQGGDDGEGNINIYFTIPNEEIFLIYKLNSQGKLEETSWNDEEKEVQVTWTSRKSECDVYGTCGAFASCSSLNTPICSCLKGFEPRSIQEWNRNNWTGGCVRRTPLQCERDNNKTTSTKEDGFLKLQMVKVPDFASGIAETPDICRRLCLENCSCTAYSNDAGIGCMTWTGNLLDIEQLQMGGLDLYFRVAHAELAKLWSSIKSTRKKNKKDFQLFNKGGTSDENNSDDVFGGLSEVRLQELLLFDFGKLAIATNNFHLSNKLGQGGFGPVYKGKLQDGREIAVKRLSRASGQGLEEFVNEVVVLCKLQHRNLVRLLGCCIDGDEKMLMYEYMPNKSLDAFIFDLSKNKLLDWRTRYSIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEEFNPKVSDFGMARIFGGREDQANTTRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEILTGRRNSSLYNNESLSLLGFVWIQWREENILSLIDPEIYDHSHHKNISRCIHIGLLCVQESAVDRPNMATVISMLNSEVASLPPPSQPAFILMRNMLNSRSPEENQSICSINTAGITDICGR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01408 823 CDD STKc_IRAK 512 777 - -
Mepo3g01408 823 Pfam PAN-like domain 367 425 IPR003609 -
Mepo3g01408 823 FunFam receptor-like serine/threonine-protein kinase SD1-8 481 581 - -
Mepo3g01408 823 ProSiteProfiles Bulb-type lectin domain profile. 45 164 IPR001480 -
Mepo3g01408 823 SUPERFAMILY Protein kinase-like (PK-like) 491 805 IPR011009 -
Mepo3g01408 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 44 767 - -
Mepo3g01408 823 PIRSF SRK 466 823 IPR024171 GO:0004674
Mepo3g01408 823 PIRSF SRK 22 466 IPR024171 GO:0004674
Mepo3g01408 823 Gene3D Transferase(Phosphotransferase) domain 1 582 783 - -
Mepo3g01408 823 Gene3D Phosphorylase Kinase; domain 1 475 581 - -
Mepo3g01408 823 Pfam Protein tyrosine and serine/threonine kinase 507 776 IPR001245 GO:0004672|GO:0006468
Mepo3g01408 823 SMART ntp_6 367 439 IPR003609 -
Mepo3g01408 823 Gene3D - 43 164 IPR036426 -
Mepo3g01408 823 ProSiteProfiles Protein kinase domain profile. 506 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01408 823 CDD B_lectin 51 163 IPR001480 -
Mepo3g01408 823 Pfam D-mannose binding lectin 91 193 IPR001480 -
Mepo3g01408 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Mepo3g01408 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 198 IPR036426 -
Mepo3g01408 823 Pfam S-locus glycoprotein domain 226 335 IPR000858 GO:0048544
Mepo3g01408 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 784 - -
Mepo3g01408 823 SMART serkin_6 506 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01408 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 41 164 - -
Mepo3g01408 823 ProSiteProfiles PAN/Apple domain profile. 357 440 IPR003609 -
Mepo3g01408 823 SMART blect_4 51 167 IPR001480 -
Mepo3g01408 823 CDD PAN_AP_plant 353 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01408 Mepo-Chr3 20860184 20863928 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01408 490 808 Receptor kinase-like Gene Family AT4G05200 58.438 7.52e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g01408 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01408 - - pcin:129286414 922.924