Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01404 ATGGTTTTAAGCAAGTGCAAAAATTTGATCTCAGTTTTGAATTTCATCACATCATTACTATGTTGTTCCTTTTTTGTTCATGTTGTTGCCACACAACAAATCATCAAAGACTCCGAAACTCTAAGCTCAAATAGTGGAAATTTCACCTTAGGATTTTTCACCCCTCAAAATTCCACAAATCGCTATGTAGGAATTTGGTGCAAAACTCAACTTTTTGTTGTATGGGTTGCCAACAGAAACCAACCATTGATCAATGATTCTTCTGGAGTTCTTGAAATATCCAATGATAACAATATTGTTCTTTTGAATGGAAAGAAAAATGTTATTTGGTCAACAAATTTGTACAATGTTTCAACAAAAACCAATTCTAGTGTCACGCTTTCAGATTATGGAAGTCTTGAATTGTTTGAAACAACTACAGAAAAAACCATATGGGCGAGTTCCGATCATCCTACAAATTCATTATTACCAAGCCTGCCATTTACAAGCAACATGACACTCATGTCATGGAAAACACCTATTGATCCGTCCAACGGAAGCTTCTCTTTAGGCATCGAACGGTTAAATATGCCAGAAGTTTTTATTAGGAAAGAAAATCGGCCATATTGGCGAAGTGGTCCTTGGAACAATCAAATATTTATAGGGATACAAGACATGTCAACTCTTTATCTTAATGGTTTTCATTTCGAAAAAGATAGAACGGGAGGAACTCTTGATTTAATCTTCAGAGCAGACGACTATGGACTTGTGATGTATGTTCTTAATTCGACAGGTCAAATGAATGAAAAATCTTGGAGTATTGAGAACGAGGAATGGATGGATACATGGACTAATCAAAGATCAGATTGTGATCTTTATGGTTTTTGTGGTTCATTTGGAATTTGTAATTCAAAAGGGTCGCCAATTTGTAGGTGTTTGGAAGGGTTTGAAGCAAGAAACAATCAAGAGTGGAATAAACAAAATTGGACTAATGGATGTGTTAGGAAGACGCTGTTGCAGTGTGAAAGCGCCAACAATCAAAATAAGAGCGCAAATGGTAATGACGCAGATAGTTTTTTGAAATTGAGTCTGGTAAAAGTACCTGATTTTGCAGAATTGACATCTGTTGAACAAGATGAATGCAAAAACCAGTGTTTAATGAATTGCTCTTGCACTGCATATTCATATGTAGCTGATATTGGTTGTATGTCTTGGAATGGAAATCTAATCGATATTCAACAATTCGAAACTGGAGGATCTGATCTATACATTCGTGTACCACCATCAGATAAAGGGAACAAAGGAACAGTTATCATTACAGCTTCAGTACTAGTAGGAATTATCATAATTGCCATTGCGGCATATTTCATTTGGATAAAGGTTTCAAAGCCAGTGAGAAATAAGAAGAAGCATAGAATTTTTCAATTTAACAAAATTGAAAAGGATGAAGAATACAAAACTGACAATGTAATTGGAGAATTGTCACAAGCAAAGCTACAAGAGCTATTACTATATAGTTTTGAAAAGCTTGCAATTGCCACAAACAACTTCCATGTATCCAATAAACTTGGACAAGGAGGTTTTGGTCCTGTATACAAGGGAATACTTCAAGATGGTAAGGAAATAGCGGTCAAAAGACTTTCGAGATCATCCGGACAAGGGTTAGAAGAATTCATGAATGAAGTAGTAGTGATTTCTAAGCTTCAGCACCGCAATCTTGTAAGACTTGTAGGCTGCTGCATTGAAGGAGACGAAAAGATGTTGATGTATGAGTTCATGCCAAATAGCAGTCTGGATGCATATGTTTTTGATCCATCAAGAAATAAACTTCTGGACTGGGAGAAACGCTTTAGTATAATAGAAGGAATAGCTCGTGGATTGCTTTATCTACACAGGGATTCCAGGCTAAAGATCATACATAGAGATATGAAAGCAAGTAATATCTTGCTAGACGAGAACCTGAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTTGGAGTGAGTGAAGATCATGCCAATACTCAAAGGGTTGTCGGAACATATGGTTATATGGCTCCAGAGTATGCAATGCAAGGAGTATTTTCGGATAAATCAGACGTCTTCAGCTTTGGAGTTTTGCTAATAGAGATTGTTAGTGGAAGACGAAACTCAAGCTTTTATGAACATGAAAATTCTCTGACTCTCTTAGGATTTGCTTGGAATCAATGGAAGGAAGACAATATTTTATCTTTGATAGAACCAGAAATATATGATCATAGTAATCATAGGACTATTTCGAGATGCATACATATAGGACTGTTGTGTGTACAAGAATCAGCTGTGGACAGACCAACTATGGCTGCAGTGATTTCTATGCTGAACAGTGAAATTATGGACATTCCTCCTGCAAGGGAACCTGCATTCCTACTGAGGCAGAATATGTTGAATACAGTTTCTTCTGAAGAAAGAAATGAATTTTACTCCAATAATGCTTTGAGTATCACAGACATTCATGGAAGATAA 2487 0.3627 MVLSKCKNLISVLNFITSLLCCSFFVHVVATQQIIKDSETLSSNSGNFTLGFFTPQNSTNRYVGIWCKTQLFVVWVANRNQPLINDSSGVLEISNDNNIVLLNGKKNVIWSTNLYNVSTKTNSSVTLSDYGSLELFETTTEKTIWASSDHPTNSLLPSLPFTSNMTLMSWKTPIDPSNGSFSLGIERLNMPEVFIRKENRPYWRSGPWNNQIFIGIQDMSTLYLNGFHFEKDRTGGTLDLIFRADDYGLVMYVLNSTGQMNEKSWSIENEEWMDTWTNQRSDCDLYGFCGSFGICNSKGSPICRCLEGFEARNNQEWNKQNWTNGCVRKTLLQCESANNQNKSANGNDADSFLKLSLVKVPDFAELTSVEQDECKNQCLMNCSCTAYSYVADIGCMSWNGNLIDIQQFETGGSDLYIRVPPSDKGNKGTVIITASVLVGIIIIAIAAYFIWIKVSKPVRNKKKHRIFQFNKIEKDEEYKTDNVIGELSQAKLQELLLYSFEKLAIATNNFHVSNKLGQGGFGPVYKGILQDGKEIAVKRLSRSSGQGLEEFMNEVVVISKLQHRNLVRLVGCCIEGDEKMLMYEFMPNSSLDAYVFDPSRNKLLDWEKRFSIIEGIARGLLYLHRDSRLKIIHRDMKASNILLDENLNPKISDFGMARIFGVSEDHANTQRVVGTYGYMAPEYAMQGVFSDKSDVFSFGVLLIEIVSGRRNSSFYEHENSLTLLGFAWNQWKEDNILSLIEPEIYDHSNHRTISRCIHIGLLCVQESAVDRPTMAAVISMLNSEIMDIPPAREPAFLLRQNMLNTVSSEERNEFYSNNALSITDIHGR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01404 828 Pfam PAN-like domain 347 405 IPR003609 -
Mepo3g01404 828 SMART serkin_6 510 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01404 828 Pfam S-locus glycoprotein domain 203 312 IPR000858 GO:0048544
Mepo3g01404 828 ProSiteProfiles Protein kinase domain profile. 510 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01404 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 209 IPR036426 -
Mepo3g01404 828 CDD B_lectin 33 151 IPR001480 -
Mepo3g01404 828 Pfam Protein tyrosine and serine/threonine kinase 511 781 IPR001245 GO:0004672|GO:0006468
Mepo3g01404 828 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 772 - -
Mepo3g01404 828 PIRSF SRK 1 828 IPR024171 GO:0004674
Mepo3g01404 828 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Mepo3g01404 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 586 789 - -
Mepo3g01404 828 FunFam receptor-like serine/threonine-protein kinase SD1-8 463 585 - -
Mepo3g01404 828 SMART ntp_6 347 419 IPR003609 -
Mepo3g01404 828 Gene3D Phosphorylase Kinase; domain 1 463 585 - -
Mepo3g01404 828 CDD STKc_IRAK 516 782 - -
Mepo3g01404 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Mepo3g01404 828 Gene3D Transferase(Phosphotransferase) domain 1 586 788 - -
Mepo3g01404 828 SMART blect_4 32 151 IPR001480 -
Mepo3g01404 828 Gene3D - 26 149 IPR036426 -
Mepo3g01404 828 SUPERFAMILY Protein kinase-like (PK-like) 495 817 IPR011009 -
Mepo3g01404 828 Pfam D-mannose binding lectin 73 165 IPR001480 -
Mepo3g01404 828 CDD PAN_AP_plant 330 420 - -
Mepo3g01404 828 ProSiteProfiles PAN/Apple domain profile. 334 420 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01404 Mepo-Chr3 20766886 20770060 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01404 473 828 Receptor kinase-like Gene Family AT4G11530 52.210 6.88e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g01404 PK_Tyr_Ser-Thr 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01404 - - gsj:114424251 993.03