Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01400 ATGTTCATGTTGTTCATTTTGACCTTGCTGTGTTTTAATATTCTTGATGTTAGTGTTGCCATAGACACCATTACATCAACTCAGTTTATCAAGGACCCTGAAACTCTAAGCTCCAAGAGTGGTAACTACACCTTAGGCTTTTTTAGTCCTGAAAATTCTACGAATCGTTATGTCGGAATTTGGTGGCAGCCTCAATTCACAATCCTATGGGTGCTTAACAGAGACCAACCTCTCAAAGATTCTTCTGGTGTTGTTAGAATATCTGATAATGGTAATGATCTCGTGGTATTGAATGGAAAGAAAGAGGTGATTTGGACATCCAACGCACCGAATGTTGCAACCAATTCAAGTTCGAAACTTTTAGATTCAGGGAACCTTGTACTGCTTGAAGGCAGAACAGGAAGAACTATATGGGAGAGTTTCCAGCATCCTTCAAATGTAATGTTGCCAAACATGAAACTTACTAGCAACAAAATAACAGGTGAGAAAGTAAAACAAACATCATGGAAAACACCTTATGATCCATCCATTGGAAGCTTCTCTTTAAGTGTTGAAAGACTTACTATACCTGAAGTGTTCATCTGGAACGAAAATCAACCGTATTGGCGAACTGGTCCGTGGAATGGTAAGATTTTTACAGGACTTCCATATATGACAACTCATTATCTCGGTGGTTTACATGTTGGAGATGATGGAGAAGGAAATGTTTCATTCTTTCAAATAACATCAGATACAGTTGGTCTACTAATCTATAATTTGAGTTCAGAAGGAAATTGTGAAGAGAAATGGTGGGATGAAAAGAAGAAAGAATGGAAAGTAACATGGAATAGTCATGAAATGGAATGTGATGTTTATGGTGTATGTGGACATTTTGCAAGTTGTAATTCAGAAAGCTCACCGATATGTAGCTGTTTGAAAGGGTTTGAGCCAAAGAACAAAGATGAATGGAATAGACAAAATTGGACTGAAGGGTGTGTTAGGAGGACACCTCTTCAACAGTGTGAAAGATACAGAAATCAAAACACAAGTGAAGACAGTAACGCTGATGGTTTTTTGAAACTGTCGATGGTCAAAGTTCCCGATTTTGCAGACGGATCATCTCTCACACTGTCATCAGAAACATGCAGAAGTCAGTGTCTGGAGAATTGCTCCTGTGTTGCATACTCCTATGATGCTGACATTGGTTGTATGTCTTGGACTGGAAATCTAGTCGACATACAAAAATTCTCAAATGGAGGACTTGACTTGTATATTCGTGTAGCACACACAGAACTTGATAAAGAGAGAAACATGACAGTCATCATCATTATTATAACCGTGCTAACAGGAACTGTCTTTGTTCTTGCTTTTGTGTATATCATGTGGAGAAGAAGAACTAACCATCATGCAAGCATTCGAAGTGACAACGCGATTGGAGAACTCTCCCAAGTTAAACTCCTAGAGCTATTGCTATTTAATTTTGGCAAGCTTGCAACTGCAACCAACAACTTTCACTCATCCAACAAACTTGGGCAGGGTGGTTTCGGACCAGTATACAAGGGGGCAATGCATGATGGTCAGGAAATAGCAGTTAAAAGACTTTCTAAAGCATCTGGACAAGGTCTAAAAGAATTCATGAATGAAGTAGTGGTCATTTCTAAGCTTCAACACCGCAATCTTGTAAAACTTCTTGGCTGTTGTGTTGATGGAGAGGAAAAGATGTTGATATATGAGTACATGCCAAATAAAAGTTTGGATGTGTTTCTCTTTGATAATGAGCTTAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTTGGAGGGAATGAAGATCAAGAAAATACAAGAAGAGTTGTTGGTACTTATGGTTATATGTCTCCGGAATATGCAATGCAAGGACTGTTTTCTGATAAATCTGATGTCTTTAGCTTTGGAGTTTTACTTCTTGAGATTATTAGTGGAAGAAGAAATTCAAGCTTTTATGATTGCGAGTCTCTGACCCTTTTAGGATTTGTATGGATACAATGGCAAGAAGGCAATATTCTACCACTGATAGATCCAGAAATATATGATCCTATCCATCATAAATATATTTTGAGGTCGATACGTATAGGGCTTCTATGTGTACAGGAATTTTCCATAGACAGACCTACCATGGCGGCTGTAATTTCTATGCTGAACAGTGACATTGTAGATCTTCCTCCTCCAAAGAAACCTGCATTCATCCTGAAGCAGAATATGCTGAACTTGGTGTCGTCTGAAGAAAACAATGATGACTTGCACTCTCTCAACTTGGTCAGTATTTCAGACATCCATGGTAGATAG 2307 0.384 MFMLFILTLLCFNILDVSVAIDTITSTQFIKDPETLSSKSGNYTLGFFSPENSTNRYVGIWWQPQFTILWVLNRDQPLKDSSGVVRISDNGNDLVVLNGKKEVIWTSNAPNVATNSSSKLLDSGNLVLLEGRTGRTIWESFQHPSNVMLPNMKLTSNKITGEKVKQTSWKTPYDPSIGSFSLSVERLTIPEVFIWNENQPYWRTGPWNGKIFTGLPYMTTHYLGGLHVGDDGEGNVSFFQITSDTVGLLIYNLSSEGNCEEKWWDEKKKEWKVTWNSHEMECDVYGVCGHFASCNSESSPICSCLKGFEPKNKDEWNRQNWTEGCVRRTPLQQCERYRNQNTSEDSNADGFLKLSMVKVPDFADGSSLTLSSETCRSQCLENCSCVAYSYDADIGCMSWTGNLVDIQKFSNGGLDLYIRVAHTELDKERNMTVIIIIITVLTGTVFVLAFVYIMWRRRTNHHASIRSDNAIGELSQVKLLELLLFNFGKLATATNNFHSSNKLGQGGFGPVYKGAMHDGQEIAVKRLSKASGQGLKEFMNEVVVISKLQHRNLVKLLGCCVDGEEKMLIYEYMPNKSLDVFLFDNELNPKISDFGMARIFGGNEDQENTRRVVGTYGYMSPEYAMQGLFSDKSDVFSFGVLLLEIISGRRNSSFYDCESLTLLGFVWIQWQEGNILPLIDPEIYDPIHHKYILRSIRIGLLCVQEFSIDRPTMAAVISMLNSDIVDLPPPKKPAFILKQNMLNLVSSEENNDDLHSLNLVSISDIHGR 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01400 768 ProSiteProfiles Bulb-type lectin domain profile. 21 141 IPR001480 -
Mepo3g01400 768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 141 - -
Mepo3g01400 768 Pfam Domain of unknown function (DUF3403) 722 768 IPR021820 GO:0004674
Mepo3g01400 768 Gene3D - 16 142 IPR036426 -
Mepo3g01400 768 SMART ntp_6 346 420 IPR003609 -
Mepo3g01400 768 SUPERFAMILY Protein kinase-like (PK-like) 483 748 IPR011009 -
Mepo3g01400 768 CDD EGF 281 309 - -
Mepo3g01400 768 CDD PAN_AP_plant 339 421 - -
Mepo3g01400 768 Pfam D-mannose binding lectin 67 170 IPR001480 -
Mepo3g01400 768 ProSiteProfiles Protein kinase domain profile. 497 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01400 768 Pfam Protein tyrosine and serine/threonine kinase 499 585 IPR001245 GO:0004672|GO:0006468
Mepo3g01400 768 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 711 - -
Mepo3g01400 768 Gene3D Phosphorylase Kinase; domain 1 459 572 - -
Mepo3g01400 768 ProSiteProfiles PAN/Apple domain profile. 334 421 IPR003609 -
Mepo3g01400 768 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 175 IPR036426 -
Mepo3g01400 768 Pfam S-locus glycoprotein domain 202 312 IPR000858 GO:0048544
Mepo3g01400 768 Pfam PAN-like domain 346 406 IPR003609 -
Mepo3g01400 768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 461 572 - -
Mepo3g01400 768 Gene3D Transferase(Phosphotransferase) domain 1 577 726 - -
Mepo3g01400 768 CDD B_lectin 27 144 IPR001480 -
Mepo3g01400 768 PIRSF SRK 1 587 IPR024171 GO:0004674
Mepo3g01400 768 PIRSF SRK 582 768 IPR024171 GO:0004674
Mepo3g01400 768 SMART blect_4 27 144 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01400 Mepo-Chr3 20710537 20713867 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01400 423 738 Receptor kinase-like Gene Family AT4G05200 44.809 1.03e-92 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g01400 S_locus_glycop 2.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01400 - - cam:101513672 1010.75