Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01362 ATGGAAGCCTCTTCTTCTTCTTGGAGTTCAAGTTCAACCACAAGTTTATGCACCTACCATGTCTTTTTGAGTTTTCGAGGAGAAGATACACGCAAAGGATTCGCTGATCATTTATCTGCTTCCCTTGAAAGAAAAGGGATCACAACTTTTAGAGATGACAAAGACCTTGAGAGAGGGCAAGTCATTTCAGAAAAGCTAATCAATGCAATAAAAGATTCTATGTTTGCCATCGCTATCCTCTCACCAGACTATGCTTCCTCCACCTGGTGTTTGGATGAACTTCAAATGATCATGGAATGCAGCAATAAGGGTCTAGAAGTTTTGCCAGTCTTCTATGGTGTGGACCCATCTGATGTGAGGCATCAAAGAGGAAGCTTTGAGGATGCTTTCAGAAAACATCTAGAGAAGTTTGGTCAACACAGTGACAAGGTTGAAAGATGGAGAGATGCTTTGACACAAATTGCCATGCCAAATCTTGACCAATTCTGCCTGATATCAAATGTCAAGAACACTCATGTGCTTGACTTTACCTTGCATGAGGCATCACTAATAGAAAACATTGCTCAACACATACATAGAAAGCTGGTTCCTAAATTGCCATCTTGTGCAGAGAACCTTGTTGGGATTTCTTCAAAGGTTGAGCAAGTAAACAACCTCGTAGGTATGCGGTTGAACGATGTTCGCTTTATAGGCATATGGGGTATGGGTGGCATAGGCAAGTCAACTATTGCTAGAGCTGTCTATGAAGCAATACAAGGTGAATTTGAACTTACTTGCTTTCTTGAAAATGTTAGAGAGTTATATGAGACAAATGGTTTAGTTCACATACAAAGACAACTTCTTTCTCATCTGAGTATAAGTAGGAATGATTTTCATAATTTGTATGATGGGAAAAAGACAATACAGAACTCTTTATGCAGAAAAAAGGTTCTCCTTGTTCTTGATGATGTGAATGAATTAAACCAGTTGGAGAATTTGGCTGGTAAACAAGATTGGTTTGGTCCGGGAAGTAGAGTAATAATCACAACTAGAGATAAGCACTTGCTAATTACACATCGAGTACATAAAACTTATGAAGTTGGAATGTTATTCCAAAATGAAGCCCTTAATCTCATTTGTTTGAAAGCCTTTAAAGGTAATCAACCACAAGAAGGGTATTTGGATTTGTCCAAAGAAGTAGTGGACTACACTGGTGGTCTTCCATTGGCTCTTGAGGTGTTAGGTTCCTATCTCTATGGAAGAAATGTTGATGTTTGGCATAGTGCTATTAAAAAAATAAGAAGTGTCCCACACCCTAAAATCCAAGATAAATTGAAAATAAGTTATGAGAGTTTAGATCCAATGGAGAAAGATATTTTTCTAGATATTGCTTGTTTCTTTAAGGGAATGAAGACAGATAAAGTAATGGATATATTAGATAGTTGTGGTTATTGCCCTCAAATTGGAATCGAAATTTTGATTGAAAGATCTTTGATAACTCTAAATTGGAATAATGAACTGGGAATGCATGATTTGCTTCAAGAAATGGGCAGGGATATTGTGTTTCAAGAATCTCCGAATGATTCTAGCAAACGTAGTAGGTTGTGGTCACAAGAGGACATTGATCATGTGTTAACAAAAAACAAGGGAACTGAAGCAATTAAGAGCATAGGAATGAAATTACTTCAACCATATGAAGCATGTTGGAGCAGTGAAGCATTATTTAAGACAAGTCAGCTAAAATATCTCAGTTTATGTGAGATGACGCTTCCCCTTGGCCTCGATTGCCTTCCTAGTTCATTAAAAGTTTTTCACTGGAGAGGATGTCCTTTGAAAACTCTGCCACTAACAACTCAACTGGATGAAGTTGTTGACATTAAATTATCTCATAGCAAAATTCAGCTTTGGCAAGGAATAAAGGAATTCCGTCTTCCCTCTGCAAGATTTGACATGCTTATCACAGGGGATGAAATTCCATCTTGGTTTGTACCACAGAGAACTGTTTCCTGGGCAAAAGTACAAGTCCCTAACACTTGCTCTCTAGATGATTGGGTAGGATTTTCTCTATGTTTTCTCTTAATTAGTTATGTTGACCCACCTGAATTGTGCAAGCATGATATTGAAATTTATTTGTATGCACGTAATGGTAAGGAGTTGATCGCCAGCAGAACATTACCTCCTATGAATCCATATTATCCTCACCTTTATATTCTCTACTTGTCCATCGATCAATTTCGCGATGAAATTCTCAAAGATGGTTACTGGAGTGAGAATGGCATTGAATTTGTTTTGAAATGCTATTGCTGCTGTCGTTCATTGCAAATAGTGAGGTGCGGTTGCCGTTTGGTATATCTGAGGCAACAACTTTCTGTTAATTGGTTGCTGCAAATTGCATGTTGTTATGTCATTGCGCTGAAAAGTTTTGCAATCGGAGTGCATGTCAATCCAACTCTGAAATCTTCTCCACTCGCTCCTTCTTTAAATACCCTTGCGGAAGAGGCAAACAGTCCCGCGCATGTAAGTGATGAAACAGGACCACCAATGGTTGTTGATCTTACTAGGGAAAACTATGAAGATAAGTGGAATAACCTCAGGGAGCTAGTAAACAAAACTATTGATGACCTTCAAACTTTTTCCATTCAAGCTCAAGAGCAGGCTCTGAGAAACTGGTTTAATAAAGTGGTCAAGGGTATGAAAGTTGTGGAGCTCAAGAGATCAATCAAGCAACTGCCAGAGAAGGTAGTGATCAAAAGTCTGAATCTGGAAGATCCTGAAGAGGTGAAGCTAATTGAGAAATTGCAAGAGGGTATGCTTCATCAGAAGATGGTATTTGAAGACTTGAAAAGACAGCTAGCAGAGCTTAAGGGAGAACAGAAGCAACAGAGAATCATTCAAGAAGCTCAGATAAGGAAATCATAA 2898 0.3844 MEASSSSWSSSSTTSLCTYHVFLSFRGEDTRKGFADHLSASLERKGITTFRDDKDLERGQVISEKLINAIKDSMFAIAILSPDYASSTWCLDELQMIMECSNKGLEVLPVFYGVDPSDVRHQRGSFEDAFRKHLEKFGQHSDKVERWRDALTQIAMPNLDQFCLISNVKNTHVLDFTLHEASLIENIAQHIHRKLVPKLPSCAENLVGISSKVEQVNNLVGMRLNDVRFIGIWGMGGIGKSTIARAVYEAIQGEFELTCFLENVRELYETNGLVHIQRQLLSHLSISRNDFHNLYDGKKTIQNSLCRKKVLLVLDDVNELNQLENLAGKQDWFGPGSRVIITTRDKHLLITHRVHKTYEVGMLFQNEALNLICLKAFKGNQPQEGYLDLSKEVVDYTGGLPLALEVLGSYLYGRNVDVWHSAIKKIRSVPHPKIQDKLKISYESLDPMEKDIFLDIACFFKGMKTDKVMDILDSCGYCPQIGIEILIERSLITLNWNNELGMHDLLQEMGRDIVFQESPNDSSKRSRLWSQEDIDHVLTKNKGTEAIKSIGMKLLQPYEACWSSEALFKTSQLKYLSLCEMTLPLGLDCLPSSLKVFHWRGCPLKTLPLTTQLDEVVDIKLSHSKIQLWQGIKEFRLPSARFDMLITGDEIPSWFVPQRTVSWAKVQVPNTCSLDDWVGFSLCFLLISYVDPPELCKHDIEIYLYARNGKELIASRTLPPMNPYYPHLYILYLSIDQFRDEILKDGYWSENGIEFVLKCYCCCRSLQIVRCGCRLVYLRQQLSVNWLLQIACCYVIALKSFAIGVHVNPTLKSSPLAPSLNTLAEEANSPAHVSDETGPPMVVDLTRENYEDKWNNLRELVNKTIDDLQTFSIQAQEQALRNWFNKVVKGMKVVELKRSIKQLPEKVVIKSLNLEDPEEVKLIEKLQEGMLHQKMVFEDLKRQLAELKGEQKQQRIIQEAQIRKS 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01362 965 ProSiteProfiles TIR domain profile. 17 195 IPR000157 GO:0007165
Mepo3g01362 965 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 672 IPR044974 GO:0006952
Mepo3g01362 965 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 154 IPR035897 -
Mepo3g01362 965 Gene3D - 363 446 IPR042197 -
Mepo3g01362 965 Pfam NB-ARC domain 219 445 IPR002182 GO:0043531
Mepo3g01362 965 SMART till_3 18 157 IPR000157 GO:0007165
Mepo3g01362 965 Gene3D - 194 357 IPR027417 -
Mepo3g01362 965 SUPERFAMILY "Winged helix" DNA-binding domain 433 538 IPR036390 -
Mepo3g01362 965 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 196 - -
Mepo3g01362 965 PRINTS Disease resistance protein signature 304 318 - -
Mepo3g01362 965 PRINTS Disease resistance protein signature 229 244 - -
Mepo3g01362 965 PRINTS Disease resistance protein signature 397 411 - -
Mepo3g01362 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 456 IPR027417 -
Mepo3g01362 965 Pfam TIR domain 19 208 IPR000157 GO:0007165
Mepo3g01362 965 Gene3D - 11 193 IPR035897 -
Mepo3g01362 965 Pfam C-JID domain 647 779 IPR045344 -
Mepo3g01362 965 Coils Coil 937 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01362 Mepo-Chr3 20255527 20265159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01362 19 642 WRKY Transcription Factor Family AT4G12020 28.885 3.11e-66 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01362 - - gmx:100815486 798.505