Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01351 ATGGAGAACGATTTTGATGGTGGTGAATTATACTATCAAAAGCGCCGAGAGGTGCAACCTACTCAAACCAAATACGATAGTCTCTATGGAATTTTTGAAGATTCTAACAAGTATTCTAGAAAAAAGCTAAAGAAAGACGGTTATTTCTCGAAGAAAAAGGACCTCGATATACGGATGAATTTTGTTGTTAGTGGAACTTTTTTGAAAGAGCAGGATGCTAGTGATGATAAGCCTGGTTTAGGTTTAGCTCTTAATTTTGTTTGTGGTGGTTTTGTTAAGAAGGATGGATCTAATGAGAATGGTAACGATGATTATAAGTTTTTGCCTACCGAGTCTGGGAAGAGGATTAAGGAAGAAGCAATAAGAAGGGGGGAGGAGAGATTGCAGAAGAAGCGGAAGAATCAGGGTTTTAATTTTTTAGGTCAAGAGGGATCTTTGGATGTTGGGAAATTCGAGAGTCATACGAAGGGAATTGGAATGAAGATGTTGGAGAAGATGGGCTATAAAGGGGGTGGTCTTGGGAAGAATGAGCAGGGTACTTTAATTCCTATTGAGGCAAAATTGAGGGCTAAGAATTCTGGTCTTGGATTTAACGAATCGAAGGATAGTACAACTTTGTTGCCCGCTTTACTGACGGAGAAGAGTGCACCAGGAGGAGGTGTATGTGTACAGCCTATGGATAGAAGAAAAAGAGAATGTTTGTGGTTAAGGCAATTAAGAAACATGAAGAAAGAAGATGAGAAGTATGTAACTGCGGAGGAGTTGTTGGCCAGCAAGCAAGTAGAAGATTCAGAGGTTGCTCAGAAGATTTATGATATGAGGGGGCCACAGGTACTGATGTATACAAATTTGTCTGGTTTGATTGCTGAAGAGAAAGCAAAGGAAAAAGATGTCTCAATGCCTGAGCTTCAGCATAATGCATCACTAATAGTTCTGTTGGCTGAGGCTGACATCCAAGTGATTGATAGAGATTTCAGGAAAGAGAGGAATATAACACTTAGCTTGAAAAAAGAAAAAGAGAAGTTGGCAGCGGATGCAGCATTTCAAAAGAAGCAACTAGATAATTAA 1068 0.3951 MENDFDGGELYYQKRREVQPTQTKYDSLYGIFEDSNKYSRKKLKKDGYFSKKKDLDIRMNFVVSGTFLKEQDASDDKPGLGLALNFVCGGFVKKDGSNENGNDDYKFLPTESGKRIKEEAIRRGEERLQKKRKNQGFNFLGQEGSLDVGKFESHTKGIGMKMLEKMGYKGGGLGKNEQGTLIPIEAKLRAKNSGLGFNESKDSTTLLPALLTEKSAPGGGVCVQPMDRRKRECLWLRQLRNMKKEDEKYVTAEELLASKQVEDSEVAQKIYDMRGPQVLMYTNLSGLIAEEKAKEKDVSMPELQHNASLIVLLAEADIQVIDRDFRKERNITLSLKKEKEKLAADAAFQKKQLDN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01351 355 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 355 IPR045211 GO:0000390
Mepo3g01351 355 ProSiteProfiles G-patch domain profile. 155 200 IPR000467 GO:0003676
Mepo3g01351 355 Coils Coil 339 355 - -
Mepo3g01351 355 Coils Coil 114 134 - -
Mepo3g01351 355 SMART G-patch_5 153 198 IPR000467 GO:0003676
Mepo3g01351 355 Pfam Tuftelin interacting protein N terminal 3 76 IPR022159 -
Mepo3g01351 355 Pfam G-patch domain 155 196 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01351 Mepo-Chr3 20125589 20126656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01351 142 205 C2H2 Transcription Factor Family AT5G26610 42.188 6.16e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01351 K13103 - gmx:100783256 362.073