Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01304 ATGTTTTTCAGCGAAATTCCCCCTGAAGTGAACGAAGATATCGCTAGCTTATGTTATATTGGTTTATGGTATAATGAACTTCCAGCTTTGAAGATGGTTCTGTCACAAATTTCTTTAAAATACGGTGAAGAATATATAGGTGAAGTCAACAAGTTCAAGGAAGATTTTGGTGTTAGGAATGAGGTAATAAAGTTATTGTCAGTTCCCAAACCACTAGTTAAGGAACGAAACAAACTTTTAAAACAAATTGCCAAACGATTTGGGGTTAACTGGGATCCAGTTTCTGCTTATGAAGACTCAATGTCAAATTTAAGTATAACTAATTCAAATGTTGAAAATTTTGAAAAATGGGGAACCAAGCAAACGTGTGTTGCATGTGTAGAATATCTTATTGATCAGAAAAATTTGTGTGTGATGCTACGATATGTTACCCACTTTTGTCAACAAGTTGTTCATCATCTTCCTTACATTGAATCACGAAGGAAAATTCTCCCAGAGGTGAAGGAACCTATTGCTAGTTTATGTTATGTTGGATCAAGGTATAGTGAACTTCCAATTTTGAAGACTCTTATGTCGCAATTTTCTTTAAAATACGGAGAAGATTATATATTCAACGTCAACATGTTAATGGAAGACGGTGTTAAAGAGCAGGTTAAGCAGACCGAGGTAGAAGAAGTTCAAGAGGAGGCACCTAAACCCAAGAATCCTCTTGACCTTCTTCCTCCGAGCAAGATGATTTTGGATGACTGGAAAAGACTCTACTCTAACACTAAGAGGAACTTCCGTGAGGTCGCAATCAAAGGATTCTGGGACATGTATGATCCAGAGGGATTCTGTTTTGTCATAACTTTTTGGTAG 858 0.366 MFFSEIPPEVNEDIASLCYIGLWYNELPALKMVLSQISLKYGEEYIGEVNKFKEDFGVRNEVIKLLSVPKPLVKERNKLLKQIAKRFGVNWDPVSAYEDSMSNLSITNSNVENFEKWGTKQTCVACVEYLIDQKNLCVMLRYVTHFCQQVVHHLPYIESRRKILPEVKEPIASLCYVGSRYSELPILKTLMSQFSLKYGEDYIFNVNMLMEDGVKEQVKQTEVEEVQEEAPKPKNPLDLLPPSKMILDDWKRLYSNTKRNFREVAIKGFWDMYDPEGFCFVITFW 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01304 285 Gene3D - 99 233 IPR042277 -
Mepo3g01304 285 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 234 283 IPR036433 GO:0003746|GO:0006414
Mepo3g01304 285 Pfam Elongation factor 1 gamma, conserved domain 232 281 IPR001662 GO:0003746|GO:0006414
Mepo3g01304 285 Gene3D - 2 98 IPR042277 -
Mepo3g01304 285 SMART EF1G_2 232 284 IPR001662 GO:0003746|GO:0006414
Mepo3g01304 285 SUPERFAMILY eEF1-gamma domain 233 281 IPR036433 GO:0003746|GO:0006414
Mepo3g01304 285 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 233 285 IPR001662 GO:0003746|GO:0006414
Mepo3g01304 285 Pfam Regulator of Vps4 activity in the MVB pathway 114 221 IPR005061 GO:0015031
Mepo3g01304 285 Pfam Regulator of Vps4 activity in the MVB pathway 5 90 IPR005061 GO:0015031
Mepo3g01304 285 PANTHER IST1 FAMILY MEMBER 5 100 IPR005061 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01304 Mepo-Chr3 19566651 19571561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01304 235 280 Eukaryotic Initiation Factors Gene Family AT1G57720 86.957 1.95e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01304 K03233 - mtr:25499222 293.893