Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01300 ATGAACGACAACTTCGAAATTCCTCAAGCCGAAGAAATGAACGAAGATTTCGATCTTCCAGAAGAAAAGGTAGGCGATGAGAGAGAAGTCGGCGATCGTGGTCTCAAGAAGAAGCTTCTCAAACTTGGTGAAGGTTGGGATACTCCTGAATTCGGTGATGAAGTTCAAGTTCACTACACTGGAACTTTGCTTGATGGAACTAAATTTGATTCAAGTCGTGATAGAGATTCTCCTTTCAGCTTCACGCTTGGTCAAGGGCAAGTAATTCAAGGATGGGATGAAGGTATTAAAACCATGAAGAAAGGTGAAAATGCACTCTTCACCATCCCTCCCGAGCTAGCTTATGGTGAATCTGGTTCGCCTCCGACAATTCCTCCTAATGCTACGCTCCAATTTGATGTCGAGCTGTTGTCTTGGACCAGTGTGAAGGACATATGTAAAGATGGTGGTATATTTAAGAGGATACTTAAAGAGGGGGAGAAATGGGAGAACCCCAAGGATCCTGATGAAGTATTGGTTAATTATGAGGTTCGACTGGGGGATGGAAAGGTTGTAGCAAAGTCCGATGGAGTGGAGTTCACTGTCAGTGAGGGTCATTATTGCCCTGCATTCTCAAAGGCTGTTAAAGCCATGAAGAAGGGAGAGAAAGTGATTTTGTTAGTAAAGCCTCAATATGGATTTGGTGAGAAGGGGAAGCCAGCGCATGGTGATGAAGGTGCAGTTCCACCAAATGCATCACTGCAGATTACACTTGAGTTGGTTTCTTGGAAGACTGTTTCAGATGTGACTAGTGACAAGAAGGTCATAAAGAAGATCCTCAAGGAAGGGGAAGGATACGAGCGTCCGAATGAAGGAGCCATCGTAAAATTGAAACTAGTTGGTAAACTGCAAGATGGTACTGTCTTTTTTGAAAAGGGCCATGATGAAGAAGAGAAGCTGTTTGAATTCAAAACAGATGAGGAACAAGTCATTGATGGGCTTGATAAAGCTGTTTTGACTATGAAGAAGGGTGAGGTAGCATTATTGATTATTGCTCCCGAGTATGCATTTGGTTCATCACAGTCCCAGCAAGAGTTGGCTGTAATTCCTCCTAATTCAACCGTGTATTATGAAGTTGAGCTAGTGTCATATGAGAAGGAGAAGGAGTCTTGGGATATGAACACTCAGGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGGAATGTTTTGTTTAAAGCTGGTAAATATGAAAGAGCTTCCAAAAGATATGACAAGGCTGCGAAGTACATAGAGTATGATTCCTCCTTCAGCGAGGAGGAGAAAAAGCTGTCGAAGACCTTGAAAATTGCCTCTTATCTTAACAACGCTGCTTGCAAGTTAAAGTTGAAAGAGTATAAAGATGCAGAGAAATTGTGTACTAAGGTGTTGGACATTGAGAGCACAAATGTTAAAGCCCTCTATAGAAGGGCCCAAGCAAGTATGCAGTTAACTGACTTGGATTTGGCCGAAATTGACATAAAAAAAGCTCTTGAGGTTGACCCTGACAACAGGGAAGTAAAGCTGGAGTACAGGAATTTGAAGGAAATGGTAAAGGAGTACAATAATAAGCAGGCAAAATTCTATGGAAATATGTTCGGCTTGAGAAAGGCTTGA 1638 0.4206 MNDNFEIPQAEEMNEDFDLPEEKVGDEREVGDRGLKKKLLKLGEGWDTPEFGDEVQVHYTGTLLDGTKFDSSRDRDSPFSFTLGQGQVIQGWDEGIKTMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKRILKEGEKWENPKDPDEVLVNYEVRLGDGKVVAKSDGVEFTVSEGHYCPAFSKAVKAMKKGEKVILLVKPQYGFGEKGKPAHGDEGAVPPNASLQITLELVSWKTVSDVTSDKKVIKKILKEGEGYERPNEGAIVKLKLVGKLQDGTVFFEKGHDEEEKLFEFKTDEEQVIDGLDKAVLTMKKGEVALLIIAPEYAFGSSQSQQELAVIPPNSTVYYEVELVSYEKEKESWDMNTQEKIEAAGKKKEEGNVLFKAGKYERASKRYDKAAKYIEYDSSFSEEEKKLSKTLKIASYLNNAACKLKLKEYKDAEKLCTKVLDIESTNVKALYRRAQASMQLTDLDLAEIDIKKALEVDPDNREVKLEYRNLKEMVKEYNNKQAKFYGNMFGLRKA 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01300 545 PANTHER PEPTIDYLPROLYL ISOMERASE 8 140 - -
Mepo3g01300 545 FunFam Peptidylprolyl isomerase 144 257 - -
Mepo3g01300 545 SUPERFAMILY TPR-like 383 539 IPR011990 GO:0005515
Mepo3g01300 545 Coils Coil 511 531 - -
Mepo3g01300 545 SUPERFAMILY FKBP-like 19 149 - -
Mepo3g01300 545 SUPERFAMILY FKBP-like 259 395 - -
Mepo3g01300 545 Gene3D - 142 257 IPR046357 GO:0003755
Mepo3g01300 545 FunFam Peptidylprolyl isomerase 25 143 - -
Mepo3g01300 545 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 285 378 IPR001179 GO:0003755
Mepo3g01300 545 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 140 IPR001179 GO:0003755
Mepo3g01300 545 SMART tpr_5 478 511 IPR019734 GO:0005515
Mepo3g01300 545 SMART tpr_5 395 428 IPR019734 GO:0005515
Mepo3g01300 545 SMART tpr_5 444 477 IPR019734 GO:0005515
Mepo3g01300 545 FunFam Peptidylprolyl isomerase 258 380 - -
Mepo3g01300 545 ProSiteProfiles TPR repeat profile. 478 511 IPR019734 GO:0005515
Mepo3g01300 545 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 163 253 IPR001179 GO:0003755
Mepo3g01300 545 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 279 375 IPR001179 GO:0003755
Mepo3g01300 545 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 137 IPR001179 GO:0003755
Mepo3g01300 545 SUPERFAMILY FKBP-like 144 260 - -
Mepo3g01300 545 Gene3D Tetratricopeptide repeat domain 381 538 IPR011990 GO:0005515
Mepo3g01300 545 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 168 257 IPR001179 GO:0003755
Mepo3g01300 545 Gene3D - 4 141 IPR046357 GO:0003755
Mepo3g01300 545 MobiDBLite consensus disorder prediction 1 30 - -
Mepo3g01300 545 Gene3D - 258 379 IPR046357 GO:0003755
Mepo3g01300 545 FunFam Peptidylprolyl isomerase 383 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01300 Mepo-Chr3 19523072 19529531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01300 1 541 Calmodulin-binding Proteins AT3G25230 75.137 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01300 K09571 - gmx:100812632 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01300 3 19523072 19529531 Mepo1g04463 1 52383082 52388557 PCT