Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01296 ATGAACAATCATTTCAAAATCAAACATAGAGTTGAATTCAGGGAAATGCTTGTTAAATTAGCCTTAAACCAAGCTCTTACCATGCAAAAAGAAGCACAAGAAAATTCCCAACAACAACAAAACTCATCTGTGCATAAAACGGTTCATGGTGATTGTTTCAAGTTATTCGAAAACACAATTTTTCATCTCAACCGTACACTTGAAGGCTTAAACAATGCAAGCAAAAATTGTTCACCTAATGATGTACAAACATGGCTCACAACTTCTCTCACAAATATTGAAACATGTAAAAGTGGAGCTTTAGAACTCAATGCTCAAGATTTCAATTTCATTATGCAAACCAATAAACAGAAGAAGGGTCATTTCCAAATTGGTTTTCTATGCATGAAAAGGAAGCTTTTGCAGTTTAAGTCTCCAGTAAAGTACAATATTGTGGTGGCAAAAGATGGTTCTGGACAGTACAAGACTGTGCAAGCTGCTCTAAATGTTGCTGCTAAGAGAAAATATAAGACAAGGTTTGTGATACATGTGAAGAAAGGTGTTTATAAAGAGAACATTGAGGTTGCTGTTCACAATGATAACATTATGTTGGTTGGTGATGGGATGCAAAATACCATAATAACAAGTTCTAGAAGTGTTCAAGGTGGTTTTACCACTTATAGCTCTGCAACAGCAGGCATTGATGGACTTCATTTCATTGCACGCGACATAACCTTCCAAAATTCTGCTGGTCCTCATAAAGGTCAAGCTGTGGCGCTCCGATCAGCCTCAGATCTCTCTGTCTTCTACCGGTGTGCTATATCGGGCTACCAAGACACCCTCATGGCTCACGCGCAACGTCAATTTTACAGACAATGCTTCATCTATGGCACCGTAGACTTCATCTTTGGCAACGCCGCAGTCGTATTCCAAAATTGTAAAATTTTCCCAAGAAAGCCTTTAGATGGCCAAGCAAACATGATCACGGCCCAAGGTCGAGGTGACCCATTCCAAAACACTGGAATTTCATTCCACAATTGTCAAATTAGGGCTGCATCAGATCTAAAGCCTGTTGTTGACAAGTACAAAACCTTCTTGGGCAGGCCTTGGCAACAATATTCAAGAGTTATGGTGATGAAAACTTTTATGGACACTTTAGTGAGCCCCATAGGTTGGTCTCCATGGGGTGACACTGATTTTGCTCAAGATACATTGTATTATGGCGAGTATGAGAATTATGGACCTGGCTCATCAACAACAAATAGAGTAAAATGGCCTGGTTATTATGTGATAACAAACCCTAATGAAGCATCAAAGTTTACGGTTGCTGGACTCCTTGCTGGACCAACATGGTTGGCTACAACTATTGTGCCATTTACATCTGGTCTTGGATCTTTTATGTTGTGCTATAGCTATTTCTTCATTGCCTCAATTATTGTACTTAATTCTTTGTAA 1434 0.3919 MNNHFKIKHRVEFREMLVKLALNQALTMQKEAQENSQQQQNSSVHKTVHGDCFKLFENTIFHLNRTLEGLNNASKNCSPNDVQTWLTTSLTNIETCKSGALELNAQDFNFIMQTNKQKKGHFQIGFLCMKRKLLQFKSPVKYNIVVAKDGSGQYKTVQAALNVAAKRKYKTRFVIHVKKGVYKENIEVAVHNDNIMLVGDGMQNTIITSSRSVQGGFTTYSSATAGIDGLHFIARDITFQNSAGPHKGQAVALRSASDLSVFYRCAISGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCKIFPRKPLDGQANMITAQGRGDPFQNTGISFHNCQIRAASDLKPVVDKYKTFLGRPWQQYSRVMVMKTFMDTLVSPIGWSPWGDTDFAQDTLYYGEYENYGPGSSTTNRVKWPGYYVITNPNEASKFTVAGLLAGPTWLATTIVPFTSGLGSFMLCYSYFFIASIIVLNSL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01296 477 PANTHER PECTINESTERASE 15 446 - -
Mepo3g01296 477 CDD PMEI-like_3 12 112 - -
Mepo3g01296 477 SUPERFAMILY Pectin lyase-like 139 455 IPR011050 -
Mepo3g01296 477 Gene3D Invertase/pectin methylesterase inhibitor family protein 4 124 IPR035513 -
Mepo3g01296 477 FunFam Pectinesterase 137 456 - -
Mepo3g01296 477 Pfam Pectinesterase 143 441 IPR000070 GO:0030599|GO:0042545
Mepo3g01296 477 Pfam Plant invertase/pectin methylesterase inhibitor 12 101 IPR006501 GO:0004857
Mepo3g01296 477 Gene3D - 137 456 IPR012334 -
Mepo3g01296 477 ProSitePatterns Pectinesterase signature 2. 288 297 IPR033131 -
Mepo3g01296 477 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 11 106 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01296 Mepo-Chr3 19408312 19410466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01296 12 456 Carbohydrate Esterase AT5G51490 55.180 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01296 K01051 - gmx:100806133 678.707