Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01285 ATGAATCACGGCGGCGAAACATTGGACTTCCGAACCCTTAAAATTTTATCCGCCGTCGGTCGTGGTGCAAAGGGTGTCGTGTTTCTTTCAAGAACCTACGGATCATCGAAAGAAGAATGGTTGGCATTGAAAGTGATATCTAAAGAGCTTCTTTTGAAGAAAAATAATGGAAATGATGGTGAATGCAAAAGGGTGAAATTTGAACAACAAATACTACGTCGTTTTGATCATCCTCTCTTGCCTAGGTTTAAAGGAGCTTTTGAAACTGAAAAGCTTATTGGATTTGCTATTGATTATTGTCATGGTGGGAATTTGCATTCTCTTAGAAAGAAACAACCGGAGAAAAAATTCTCTGAAGAAACAATCAGGTTTTATGCAGTGGAATTGGTGTTAGCATTGGAGTACCTACACAATTTAGGAGTAGTTTATAGAGATTTGAAGCCGGAGAATATCATGATTCAACAAACGGGTCACATAATGCTTGTAGATTTCGACCTATCAAAGAAATTAAATCCAAAATCACCAAACTCATTGAGTTCCAACTCGTCACCAGGTTCCAACTCACCACCAAATACAAAAAACAGAAGGAAGAGATGGTTATCGAAGTTCTATTCATGTCATTCCTATGTTGGGAAACCGAAATTTGAATCATTGAGTCAAATCGATATCAACTCGGTTTTTAAAAGGAGTGAGTCAGACTCAGTTGAAAAGTCAAACTCGTTTGTGGGAACTGAGGATTACGTGGCACCTGAAGTTATATTAGGGAATGGACATAATTTTGGTGTTGATTGGTGGTCATACGGTGTCGTTTTGTATGATTTGCTTTATGGAACGACGCCGTTTAGTAGTCCAAATAGGAAAGAAACGTTTCACAAGATCTTGACAATGGAGGTTGAACAAAAGGGTGAATCAACACCGTTGAAGGATTTGATTGCAAAGTTGCTTGAGAAAGATCCTGATCGTAGGATTGAAGTTGATGAAATAAAGGGTCATGATTTCTTTAAAGGTGTGAAATGGAATACGGTGTTGCATATTGTGCGTCCACCGTATATTCCTCAGAATGAAGTTGAGGACAAAGCTGGGTTTTCGAGAAAAGATGTTGAGTCCTTTGTACATGGGATATTTTTTCCAAAGAATAAAAATAAGAGTGAGAAAGAGAAAAATAATGAGGTGAAAAAAGAAGGGAATGAGAAGGAGAAGGATGAAAATGATAATAATAAGAATGTGTGGGTTGAGAAGTTGAGTCAGACTCAAACTAAGGATGAAAATTTTTTGATTTTTTGA 1284 0.3731 MNHGGETLDFRTLKILSAVGRGAKGVVFLSRTYGSSKEEWLALKVISKELLLKKNNGNDGECKRVKFEQQILRRFDHPLLPRFKGAFETEKLIGFAIDYCHGGNLHSLRKKQPEKKFSEETIRFYAVELVLALEYLHNLGVVYRDLKPENIMIQQTGHIMLVDFDLSKKLNPKSPNSLSSNSSPGSNSPPNTKNRRKRWLSKFYSCHSYVGKPKFESLSQIDINSVFKRSESDSVEKSNSFVGTEDYVAPEVILGNGHNFGVDWWSYGVVLYDLLYGTTPFSSPNRKETFHKILTMEVEQKGESTPLKDLIAKLLEKDPDRRIEVDEIKGHDFFKGVKWNTVLHIVRPPYIPQNEVEDKAGFSRKDVESFVHGIFFPKNKNKSEKEKNNEVKKEGNEKEKDENDNNKNVWVEKLSQTQTKDENFLIF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01285 427 MobiDBLite consensus disorder prediction 380 408 - -
Mepo3g01285 427 MobiDBLite consensus disorder prediction 380 413 - -
Mepo3g01285 427 Coils Coil 381 401 - -
Mepo3g01285 427 SUPERFAMILY Protein kinase-like (PK-like) 14 358 IPR011009 -
Mepo3g01285 427 SMART serkin_6 13 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01285 427 FunFam Serine/threonine-protein kinase OXI1 104 172 - -
Mepo3g01285 427 Pfam Protein kinase domain 236 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01285 427 Pfam Protein kinase domain 15 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01285 427 PANTHER FLIPPASE KINASE 1-RELATED 7 378 - -
Mepo3g01285 427 Gene3D Phosphorylase Kinase; domain 1 14 103 - -
Mepo3g01285 427 Gene3D Transferase(Phosphotransferase) domain 1 104 174 - -
Mepo3g01285 427 Gene3D Transferase(Phosphotransferase) domain 1 234 353 - -
Mepo3g01285 427 MobiDBLite consensus disorder prediction 173 194 - -
Mepo3g01285 427 ProSiteProfiles AGC-kinase C-terminal domain profile. 335 427 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mepo3g01285 427 ProSiteProfiles Protein kinase domain profile. 13 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01285 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Mepo3g01285 427 FunFam Serine/threonine-protein kinase OXI1 236 353 - -
Mepo3g01285 427 MobiDBLite consensus disorder prediction 173 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01285 Mepo-Chr3 19307163 19309176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01285 7 427 AGC Kinase Gene Family AT3G25250 52.558 5.43e-136 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo3g01285 Pkinase 1.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01285 K20714 - gmx:100813693 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01285 3 19307163 19309176 Mepo3g01285 3 19307163 19309176 ECH
Mepo3g01285 3 19307163 19309176 Mepo1g04486 1 52616122 52617920 PCT