Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01284 ATGGCCGTTCCATTGCTCACCAAGAAGATTGTGAAGAAGCGTGTCAAGAGGTTCATCAGGCCACAAAGTGACAGGAGAATATGTGTGAAGCAAAGCTGGCGCAGGCCAAAGGGTATTGATTCACGAGTTAGGAGAAAATTCAAAGGAGTTACTTTGATGCCTAACATTGGATACGGCTCAGACAAGAAGACCCGCCACTATTTGCCTAATGGATTCAAGAAGTTTGTCGTGCACAATGTCCAGGACCTGGAACTTTTGATGATGCACAACAGGACATACTGTGCTGAGATTGCACACAATGTGTCAACCAGGAAAAGGAAGGACATTGTTGAACGTGCAGCACAATTGGATGTTGTTGTCACCAACAAGCTGGCCAGGTTGCGCAGTCAAGAAGACGAGTGA 402 0.4627 MAVPLLTKKIVKKRVKRFIRPQSDRRICVKQSWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVQDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVVTNKLARLRSQEDE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01284 133 CDD Ribosomal_L32_L32e 18 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Mepo3g01284 133 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 133 IPR001515 GO:0003735|GO:0005840|GO:0006412
Mepo3g01284 133 SUPERFAMILY Ribosomal protein L32e 2 131 IPR036351 -
Mepo3g01284 133 SMART Ribosomal_L32e_2 15 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Mepo3g01284 133 Pfam Ribosomal protein L32 16 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Mepo3g01284 133 Coils Coil 124 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01284 Mepo-Chr3 19302344 19304475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01284 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 89.474 5.33e-89 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01284 K02912 - aof:109825329 243.817