Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01269 ATGATGGTACCAACAAGAGTGAGTTCAAGACTCCAGAATCACTCTAAGATTCAATACAACATTTACAACAGCAGCGGCAACAAAGTTTTTGCCCAACATGTTGAAAAGATTGAACTTGGAAGTAAAGAGGAAAGTTTGGTATCAACAACAAAGGTTTATTCACAACTTGAAAATGGAAACAAAATTCCAGATGATATTAACCATAAGAGAGGCATGATCAGTTTTGATGACAATATTGTTGAGAAGAGAACCAAGCTCAACTCTTTGAGAAGAAAACCTTGCTCTCATTCAAGTTCAAGAATCTCTCGTACAAGATCAACAAGTAATGATTCACTTGTCTTTGATGGACTTGACTTTAGGGGCATTTTGTCCTTGAGAGAAACATCTAGGCTTGCCAATCTTCGTCTCCTTGCTAAGCAGGAAGAGAAGAATCAAAGCAAGAATCGACGCAAGAAGGGGAAAAATATTGCAACGCTTTTGAGGGCAAGCAATGTAGAGAAAAATGGCATAGATAACGAATACGTTCCTGGAATCACTACTTCAAAGTATCTGATAAATAAGCTTCGGGAACTTGCTAAAGTGGGAACATATAAGATTAATTTAATGGAAGGACAAGTCTCTAAAGCTCTTTCTTCTTCTCCAAGTTTGGTATACACGGACATTAGCAATGGACAAGAAGCTATCAGCATTATTGCAACCAATGATTTTGATGATCCTCCGGTTGCACCCACAGTTCCATCTAGTGCTGCGGGATGCAATTGCAAGGGAAGTTGTAGAACCAAAAGATGTTCTTGTGCTAATCATAATGGCTTGGAGTTTTCATACAATAACAATGGCAGATTGATTGAGCCGCAAGACATCGTGGTCGAATGTGGGCCGCAATGTGGATGCGGACCTAAATGCGGAAACAAGATTTCTCAACAGGGTTTAAGTTACCGACTTGAGGTTTATCGTACTCCCAAGAAAGGTTGGGCGGTAAGAACATGGGACTTTATCCCATCAGGTGCACCGGTTGTTGAGTATATTGGTGTACTTAGTAGAGACGATGAGCTAGGAAGTGCCAACGGAAATGATTATATATTCGATATTGATTGTTTGCACACAATTAATAGTGTAGATGGAAGAGAGAGACGGTTGGGTAATGTACCATTGCCTATAAACAATTTATCTGAAAAAAGGGACGAATTAATGGAAAAAGATTCTGAATATTGCATAGATGCTGGTTCTTTTGGAAATGTTTCAAGATTTATCAACCATGGATGTGAACCAAACCTCTTTGTACAGTGTGTTCTCAGCAGCCACAGAGATCCTAGACTAGCTCGTGTGGTGCTATTTGCAGCAGAAGACATACCTCCCTATCAGGAACTCACCTATGACTATGGTTACACACTCGATAGTGTGTCTGATTCTGATGGAAAAATCAAACAGCTTCAATGTCATTGTGGTGCAAAGGAATGTCGTAAGCGCTTGTACTAG 1476 0.3984 MMVPTRVSSRLQNHSKIQYNIYNSSGNKVFAQHVEKIELGSKEESLVSTTKVYSQLENGNKIPDDINHKRGMISFDDNIVEKRTKLNSLRRKPCSHSSSRISRTRSTSNDSLVFDGLDFRGILSLRETSRLANLRLLAKQEEKNQSKNRRKKGKNIATLLRASNVEKNGIDNEYVPGITTSKYLINKLRELAKVGTYKINLMEGQVSKALSSSPSLVYTDISNGQEAISIIATNDFDDPPVAPTVPSSAAGCNCKGSCRTKRCSCANHNGLEFSYNNNGRLIEPQDIVVECGPQCGCGPKCGNKISQQGLSYRLEVYRTPKKGWAVRTWDFIPSGAPVVEYIGVLSRDDELGSANGNDYIFDIDCLHTINSVDGRERRLGNVPLPINNLSEKRDELMEKDSEYCIDAGSFGNVSRFINHGCEPNLFVQCVLSSHRDPRLARVVLFAAEDIPPYQELTYDYGYTLDSVSDSDGKIKQLQCHCGAKECRKRLY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01269 491 SMART PostSET_3 475 491 IPR003616 -
Mepo3g01269 491 SUPERFAMILY SET domain 213 467 IPR046341 -
Mepo3g01269 491 Pfam Pre-SET motif 247 304 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g01269 491 ProSiteProfiles SET domain profile. 312 461 IPR001214 GO:0005515
Mepo3g01269 491 SMART set_7 312 467 IPR001214 GO:0005515
Mepo3g01269 491 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 91 485 - -
Mepo3g01269 491 Pfam SET domain 323 461 IPR001214 GO:0005515
Mepo3g01269 491 ProSiteProfiles Post-SET domain profile. 475 491 IPR003616 -
Mepo3g01269 491 Gene3D SET domain 211 491 IPR046341 -
Mepo3g01269 491 ProSiteProfiles Pre-SET domain profile. 250 309 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g01269 491 SMART preset_2 218 296 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01269 Mepo-Chr3 19109367 19112698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01269 175 491 EF-hand Containing Proteins AT5G13960 53.274 1.00e-120 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo3g01269 SET 6.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01269 K11420 - cam:101510877 577.785