LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g01240	ATGAACAACTTCTACTTGGTCTTGCTTCACATTTCTCTATCCTTTGTGCTGACACATTCAGCACCTAAAGGATCTCTTATAACCCACCTTCCAGGCTTCAATGGATCTCTACCTTCCAAGCACTATGCTGGGTATGTGACAGTTGATGAAAGTCATGGTAGAAACTTGTATTACTACTTTGTGGAATCAGAAGGTAATTCATCCAAGGACCCTTTGGTTCTATGGCTTAATGGTGGACCAGGATGTTCTAGTTTTGATGGCTTCGTATATGAGCATGGTCCTTTTAATTTTGAAAAACCTAAGACGAAAGGAACCCTGCCTAAGTTGCAACCAAATCCATACAGCTGGTCAAAGGTTTCCAACATTATATATTTGGACTCTCCTGCTGGAGTAGGGTTTTCATACTCAAAAAATTTATCTGATTATAAGACTGCTGGAGATGTAAAGACCGCATCTGATACACATACTTTTCTTCTAAAGTGGTTTGAATTATATCCTGAGTTCCTTGCCAACCCATTATTCATTTCTGGAGAATCATATGCTGGAGTTTATGTACCTACTCTTGCTGATTTAATAGTGCAAGGGATTGAAGCTGGTACCAAGCCTAAATTCAATTTCAAGGGTTATTTGATTGGCAATCCTGTTACTGATGATGTATTTGATGGAAATGCTATTGTTTCATTTGCACATGGAATGGGTCTTATCCCAAATGATCTTTTTGAGGAGTCAACAAAAGCATGCAATGGGACTTTCTATGTGGTATACACCGATGCGTGCTACAATTTATTGGAAAAAATTCATAAGACTGATAAATCTCTTTCTATAAGGAAAAGAATGTTTGGTCGTGCTTGGCCCTATAGAGCTATTGTGAAAGATGGATATTTGCCATCATGGCCAGAACTTGTAACCAATAGTGACACTGCTCCTCCTTGCATTGACGATGAGGTTGCGATGGTATGGCTGAACAATGATAAGGTCAGGAGGGCTATTCACACCGTGGAGAAAAATGTGGTTAAGGGATGGACCTTATGTACAGGCCAAATTAAATACAAACATGATACAGGAAGTATGATCAAATACCACAAGAAACTTACTTCCAAAGGATATAGAGCATTAATATACAGTGGTGATCATGACATGTGTGTCCCATATACTGGAACTGAAGCATGGACAAGATCAATTGGATATAAGATTGTTGATGAATGGAGGCCTTGGTTAACCAATGATCAAATTGCTGGGTATACACAAGGATATGCCAACAATCTCACATTTCTGACTATAAAGGGATCTGGGCACACTGTTCCGGAATATAAGCCACAGGAGTCATTGTATTTTTACAAACAATTTCTGAATGGGTTGCATGTGTAA	1368	0.3889	MNNFYLVLLHISLSFVLTHSAPKGSLITHLPGFNGSLPSKHYAGYVTVDESHGRNLYYYFVESEGNSSKDPLVLWLNGGPGCSSFDGFVYEHGPFNFEKPKTKGTLPKLQPNPYSWSKVSNIIYLDSPAGVGFSYSKNLSDYKTAGDVKTASDTHTFLLKWFELYPEFLANPLFISGESYAGVYVPTLADLIVQGIEAGTKPKFNFKGYLIGNPVTDDVFDGNAIVSFAHGMGLIPNDLFEESTKACNGTFYVVYTDACYNLLEKIHKTDKSLSIRKRMFGRAWPYRAIVKDGYLPSWPELVTNSDTAPPCIDDEVAMVWLNNDKVRRAIHTVEKNVVKGWTLCTGQIKYKHDTGSMIKYHKKLTSKGYRALIYSGDHDMCVPYTGTEAWTRSIGYKIVDEWRPWLTNDQIAGYTQGYANNLTFLTIKGSGHTVPEYKPQESLYFYKQFLNGLHV	455

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g01240	455	ProSitePatterns	Serine carboxypeptidases, serine active site.	175	182	IPR018202	GO:0004185
	Mepo3g01240	455	FunFam	Carboxypeptidase	310	454	-	-
	Mepo3g01240	455	SUPERFAMILY	alpha/beta-Hydrolases	27	453	IPR029058	-
	Mepo3g01240	455	ProSitePatterns	Serine carboxypeptidases, histidine active site.	422	439	IPR033124	GO:0004185
	Mepo3g01240	455	FunFam	Carboxypeptidase	20	280	-	-
	Mepo3g01240	455	Pfam	Serine carboxypeptidase	31	452	IPR001563	GO:0004185\|GO:0006508
	Mepo3g01240	455	Gene3D	alpha/beta hydrolase	30	454	IPR029058	-
	Mepo3g01240	455	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	27	439	IPR001563	GO:0004185\|GO:0006508
	Mepo3g01240	455	PRINTS	Carboxypeptidase C serine protease (S10) family signature	161	186	IPR001563	GO:0004185\|GO:0006508
	Mepo3g01240	455	PRINTS	Carboxypeptidase C serine protease (S10) family signature	125	135	IPR001563	GO:0004185\|GO:0006508
	Mepo3g01240	455	PRINTS	Carboxypeptidase C serine protease (S10) family signature	112	124	IPR001563	GO:0004185\|GO:0006508
	Mepo3g01240	455	PRINTS	Carboxypeptidase C serine protease (S10) family signature	422	435	IPR001563	GO:0004185\|GO:0006508
	Mepo3g01240	455	FunFam	Carboxypeptidase	357	452	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g01240	Mepo-Chr3	18758287	18763838	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g01240	316	452	Calmodulin-binding Proteins	AT2G22960	49.635	5.24e-43	148

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g01240	K16296		-	gmx:100792057	677.167