Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01231 ATGGGTAAAGATATTGTTATGAATGAAAATAAGAGCATGAATGGGTCTATTAGGTCCATTTTCATGCATGCTGATGGAGAAGATTGGTTCCTTATGATTTTAGGCACCATTGGAGCAATAGGTGAAGGATTCAACGGTCCTTTGATTTTATATATTTGTAGCCACATGATTAACAATATTGGAAGTTCATCTACCATGGATGGAGACACTTTCATCCATAACATCAACAAGAATGCTTTGGTTTGGTTATATTTGGCTTGTGCAACTTTTCTTGTTTGCTTTCTTGAGGGTTATTGTTGGACAAGGACAAGTGGAAGACAAGCTGCAAGAATGAGATACAAGTACTTAAAAGCAGTACTTAGGCAAGAAGTTGCTTACTTTGATTTGCAGGTTACAAGCACCTCGGAAATCATCACTAGTGTCTCCAATGACACTCTTATAATTCAAGATGTCCTAAGTGAGAAGGTTCCAAATTTCTTGATGAACATTTCATTGTTCATTGGGAGCTACATAGTGGCATTTACAATGCTATGGAGAATGGCCATTGTAGCATTTCCATTTGTGATTCTTCTGGTGATCCCTGGAATAATCTATGGCAAGGTTTTGATGGGTTTATCTTGCAAGATTAGAGAAGAGTATAATCAAGCTGGTATAATTGCAGAACAAACAATATCTTCTATTAGAACTGTCTATTCTTTTGTGGGAGAAAACAAATCCATGTCTGCTTTCTCTAATGCTTTGCAAGGGATTGTTAATTTGGGGTTAAAACAAGGATTAGCTAAAGGTTTAGCTATTGGAAGCAATGGTGTTGTCTTTGCAATTTGGTCCTTCATGTGCTATTATGGTAGCAAATTGGTTATGTACCATGGTGCTAAAGGAGGGACAGTTTTTGCAGTTGGAGCATCAATAACTGTTGGTGGACTAGGATTAGGAGCAAGTTTATTAAACATAAAGTATTTCTCAGAAGCATGTTCAGCTGGTGAAAGAATCAAAGGAGTAATAGAAAGAGTTCCCAAGATAGATACCAACAATACAAAAGGAGAGATATTAAACAATGTTTTTGGGGAAGTGGAATTTGACCATGTAGAATTTGCATATCCAACAAGACCAGAAACCATTATCCTTAAAAACTTATGTCTCAAGATTCCAGCAGGGAAAACATTGGCATTGGTTGGTGAGAGCGGTTCCGGAAAATCAACTGTGATATTTTTATTGCAGCGGTTTTATGATCCGATCGGTGGTGAGATACGTCTTGATGGAGTAGCTATTCGTAACTTGCAGATTAAATGGCTTAGGTCAATGATGGGTTTGGTTAGTCAAGAACCTGCTTTATTTGCAACAAGCATTAAAGAGAATATAATTTTTGGTAAAGAAGATGCTACCGAAGATGAGATTGTTGAGGCTGCCAAGATTTGTAATGCTCATGATTTCATTTCTTTGCTTCCTCAAGGTTATAATACTCAGGTTGGAGAAAGAGGGATTCAATTATCAGGCGGACAAAAACAAAGAATAGCAATTGCTCGAGCAATAATTAAGAAACCGCGAATCTTTCTTTTGGATGAAGCAACTAGTGCGTTAGACACTGAGTCAGAAAAAATGGTCCAACAAGCACTCGAAAATGCAACAAACGGATGCACTGCCATCATAATCGCCCACCGTCTCTCCACAATCCAAAATGCTGACATTGTTGCCGTTGTGAATGATGGAAGAGTCAATGAGATTGGCTCACAGGACGAACTTCTACAAAATGAAAATGGCCTATATTCGTCCCTTGTCCGCCTTCAACAAACCAACAAATCCAAAGCACAATTAGATGAAACTGTTACAGCTACTTTCACCAATGAAGACACAGATATCACGTGTCTAGTGGACGACCTTACTAGTTCAGCTGAAGATCACATCAGTGTCCGTCTGCAGGCTAGTAATAATAACAAAAATGAAGAAGACGAGAAGCAATTAAACAATACAGTGTCATTTTGGAGACTACTTCTATTAAATGCTCCAGAATGGAAGCAAGCGGTTTTAGGGTGTTTGAGTGCGATGGTGTTTGGTGCAGTTCAACCTGTTTACGCATTTGCAATGGGGTCGATGATATCTGTGTATTTTCAAACAGATTACGAGGATCTAAAAAACAAGATTAAAATCTATTCTCTTTGTTTTCTGAGTCTATCGTTGATATCATTGGTGGTTAATGTTGGACAACATTATAACTTTGCTTACATGGGAGAGTATTTGACTAAACGTGTGAGAGAGAGCATGTTTTCTAAAATGCTCACTTTTGAAGTTGGATGGTTCGATCGAGAAGAAAATTCCAGTGGTGCTATTTGCTCTCGACTTGCCAATGATGCTAACGTGGTGAGGTCATTAGTTGGTGACAGAATGGCTTTGTTGGTACAAACTTTCTCAGCAGTAGCAACAGCATACACTATGGGTCTGATCATTTCATGGAGGCTCAACCTTGTTATGATAGCTATTCAACCAATTATAATAGCTTGCTTTTACACAAGAAGTGTATTACTCAGAAGCATGTCAAGTAAGTCTATGAAGGCCCAACAACAAAGTAGTAAGATAGCTGCTGAAGCTGTTTCAAATCATAGAACCATAACTGCTTTTTCTTCTCAAGATAGAATACTCAAAATGCTTGAAACTTCCCAACAAGACCCAATTCAAGAGAATTTTCGACAGTCGTGGTTTGCTGGTATTGGGCTTGGGTTTTCACAATTCCTCTTATCTTGTTCTTGGGCCATGAATTATTGGTACGGCGCCAAGCTTATTGCTGATGGGAACATAACAAGGAAAGCATTGTTTGAGAGTTTTATGGTGGTTGTGAGCACGGGACGGGTTATAGGGGATGCTGGAAGCATGACTAAAGACCTTGCCAAAGGTGTTGATGTTGTGAGCTCTATTTTTGCCATTCTTGATCGGTCTACCAAAATCAAGCCAGACAACCCTAATGGATATAAGCCCGAGACATTATTGGGCCATATCGAACTCTTGGACGTTCATTTTGCTTACCCCGCTAGGCCCAATATGGCAATCTTTCAAGGTTTTTCAATCAAAATTGAAGCAGGGAAATCGACGGCATTAGTGGGGCAAAGCGGGTCTGGCAAATCAACCATCATAGGATTAATAGAGAGATTCTATGACCCAATAAAAGGAAGTGTGACAATAGATGGCATGGATATAAAATCATATAACCTAAAGTCACTAAGAAAACACATAGCACTTGTGAGCCAAGAGCCAACATTGATAAATGGAACCATAAGAGACAACATTGCAAATGGAACAACATGCGGCAACATCGATGAAACTGAGATCATAGAGGCAGCAAGAGTAGCCAATGCTCATGATTTCATTGCTAGCTTAAAAGATGGGTATGAGACATGGTGTGGGGACAAAGGAGTGCAACTTTCAGGGGGTCAAAAACAAAGGATAGCAATAGCTAGAGCTATGTTGAAGAATCCAAAGGTGTTGCTACTAGATGAAGCAACAAGTGCACTAGATAACAATTCAGAGAGGGTAGTGCAAGATGCATTGAATAAGGTAATGGTTGGAAGGACTAGTGTGGTTGTGGCACATAGGTTGAGTACCATACACAATTGTGATGTTATTGCTGTTTTAGAAAAAGGGAAAATGGTTGAGATTGGAACTCACAAAGCATTGTTGGCTAAAGGACCTTGTGGTGCTTACTACTCTTTGGTGCATCTTCAAACTAAACATGCATAA 3726 0.3913 MGKDIVMNENKSMNGSIRSIFMHADGEDWFLMILGTIGAIGEGFNGPLILYICSHMINNIGSSSTMDGDTFIHNINKNALVWLYLACATFLVCFLEGYCWTRTSGRQAARMRYKYLKAVLRQEVAYFDLQVTSTSEIITSVSNDTLIIQDVLSEKVPNFLMNISLFIGSYIVAFTMLWRMAIVAFPFVILLVIPGIIYGKVLMGLSCKIREEYNQAGIIAEQTISSIRTVYSFVGENKSMSAFSNALQGIVNLGLKQGLAKGLAIGSNGVVFAIWSFMCYYGSKLVMYHGAKGGTVFAVGASITVGGLGLGASLLNIKYFSEACSAGERIKGVIERVPKIDTNNTKGEILNNVFGEVEFDHVEFAYPTRPETIILKNLCLKIPAGKTLALVGESGSGKSTVIFLLQRFYDPIGGEIRLDGVAIRNLQIKWLRSMMGLVSQEPALFATSIKENIIFGKEDATEDEIVEAAKICNAHDFISLLPQGYNTQVGERGIQLSGGQKQRIAIARAIIKKPRIFLLDEATSALDTESEKMVQQALENATNGCTAIIIAHRLSTIQNADIVAVVNDGRVNEIGSQDELLQNENGLYSSLVRLQQTNKSKAQLDETVTATFTNEDTDITCLVDDLTSSAEDHISVRLQASNNNKNEEDEKQLNNTVSFWRLLLLNAPEWKQAVLGCLSAMVFGAVQPVYAFAMGSMISVYFQTDYEDLKNKIKIYSLCFLSLSLISLVVNVGQHYNFAYMGEYLTKRVRESMFSKMLTFEVGWFDREENSSGAICSRLANDANVVRSLVGDRMALLVQTFSAVATAYTMGLIISWRLNLVMIAIQPIIIACFYTRSVLLRSMSSKSMKAQQQSSKIAAEAVSNHRTITAFSSQDRILKMLETSQQDPIQENFRQSWFAGIGLGFSQFLLSCSWAMNYWYGAKLIADGNITRKALFESFMVVVSTGRVIGDAGSMTKDLAKGVDVVSSIFAILDRSTKIKPDNPNGYKPETLLGHIELLDVHFAYPARPNMAIFQGFSIKIEAGKSTALVGQSGSGKSTIIGLIERFYDPIKGSVTIDGMDIKSYNLKSLRKHIALVSQEPTLINGTIRDNIANGTTCGNIDETEIIEAARVANAHDFIASLKDGYETWCGDKGVQLSGGQKQRIAIARAMLKNPKVLLLDEATSALDNNSERVVQDALNKVMVGRTSVVVAHRLSTIHNCDVIAVLEKGKMVEIGTHKALLAKGPCGAYYSLVHLQTKHA 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01231 1241 SMART AAA_5 1023 1197 IPR003593 GO:0016887
Mepo3g01231 1241 SMART AAA_5 384 570 IPR003593 GO:0016887
Mepo3g01231 1241 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 674 961 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g01231 1241 CDD ABC_6TM_Pgp_ABCB1_D1_like 32 330 - -
Mepo3g01231 1241 Gene3D - 347 596 IPR027417 -
Mepo3g01231 1241 CDD ABC_MTABC3_MDL1_MDL2 996 1237 - -
Mepo3g01231 1241 Pfam ABC transporter transmembrane region 32 304 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g01231 1241 Pfam ABC transporter transmembrane region 675 944 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g01231 1241 SUPERFAMILY ABC transporter transmembrane region 661 975 IPR036640 GO:0005524|GO:0016020
Mepo3g01231 1241 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 996 1234 IPR003439 GO:0005524
Mepo3g01231 1241 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 33 299 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g01231 1241 FunFam ABC transporter B family member 4 347 603 - -
Mepo3g01231 1241 ProSitePatterns ABC transporters family signature. 496 510 IPR017871 GO:0005524|GO:0016887
Mepo3g01231 1241 Pfam ABC transporter 375 524 IPR003439 GO:0005524
Mepo3g01231 1241 PANTHER ABC TRANSPORTER B FAMILY 8 686 IPR039421 -
Mepo3g01231 1241 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 357 593 IPR003439 GO:0005524
Mepo3g01231 1241 FunFam ABC transporter B family member 4 986 1241 - -
Mepo3g01231 1241 FunFam Putative ABC transporter B family member 8 638 984 - -
Mepo3g01231 1241 ProSitePatterns ABC transporters family signature. 1137 1151 IPR017871 GO:0005524|GO:0016887
Mepo3g01231 1241 SUPERFAMILY ABC transporter transmembrane region 26 338 IPR036640 GO:0005524|GO:0016020
Mepo3g01231 1241 CDD ABC_MTABC3_MDL1_MDL2 357 595 - -
Mepo3g01231 1241 Gene3D - 986 1241 IPR027417 -
Mepo3g01231 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 595 IPR027417 -
Mepo3g01231 1241 CDD ABC_6TM_Pgp_ABCB1_D2_like 663 979 - -
Mepo3g01231 1241 Pfam ABC transporter 1015 1165 IPR003439 GO:0005524
Mepo3g01231 1241 Gene3D ABC transporter type 1, transmembrane domain 20 962 IPR036640 GO:0005524|GO:0016020
Mepo3g01231 1241 FunFam ABC transporter B family member 1 19 353 - -
Mepo3g01231 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 985 1237 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01231 Mepo-Chr3 18620180 18626236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01231 16 1237 Calmodulin-binding Proteins AT2G36910 43.765 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01231 K05658 - gmx:100809399 1756.5