Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01230 ATGAAGACTTCACCTATGTTATTCCTATTTTCAACCTTTCAGTCCATAAAGTTTCTTGCAATATGTTTTTGTGCATTCATAATGGCCTCTTCTACCTATGTTTCTTCTTCTTCTTCAACCATTAATGTAAAAAGTAGAGAAGCAAGTTCTTTGTTGAAGTGGAAAAGCAACCTTGAAATAGAAAGCCAAGCTTTGCTATCTTCATGGACTGGCAACAATTCATGCAACTGGCTTGGAATTACATGTGATGAAGATCACAAATTTGTAACCAATGTAAATCTCACTAATATGGGATTAAAAGGTACACTTGAAACTCTTAACTTCTCATCATTTCCAAACATACTCACTCTTAATCTTAGCGGCAACTTTTTGAATGGAAGTATTCCTCCCGATATCGATGTGTTGTCAAAACTATCTCATCTTGATCTTAGTAACAATGATCTCTCAGGGCATATCCCGTTTTCGATAGGAAAGTTGGCTAACTTGATGTATCTAAATTTAGCAAAGAACCAAATTTCTGGCCACATCCCTAAGGAGATTGAGAAGTCAATGAACCTAAAATTTTTAATTCTTTCTCTTAACAACTTATCTGGCCATATTCCTGTGGAAATTGGGAAATTGATCAGCATGAACTATTTAAGGCTTAGCGACAATAACCTTTCTGGTTTCATTCCCCGTGAAATTGGAACGATGAAAAATTTGCTTGAAATTAATTTGTCCAATAATTCTTTATCAGGCAAACTCCCACCAACAATAGGAAATTTGAGCAATTTACAAAATCTTTTCATATTTTCAAACCATCTCACTGGGAAACTTCCAACAGAAATCAACAAGCTTTCCAATTTGGTAACATTTCTAATATTTTATAACAACTTCAGTGGTCAGCTACCTCACAACATTTGCACTGGTGGAAACTTGAAATACTTTTCTGTTTTGGATAATCACTTCACTGGTCCTGTTCCAATGAGTTTGAAGAATTGCTCAAGCATTGTAAGAATTAGGCTTGAACAAAACCAACTATCTGGAAATATAACAGATTTCTTTGGTGTGTATCCGAATTTGGACTACATGCATTTGAGTCAAAATAATTTTTATGGCCACATTTCACCGAAATGGGGAAAATGTCGTAGCTTGACATTCCTCAACATCTCCAATAATAACATATCTGGCGGTATACCACCAGAACTAGGTGAGGCAACCAATTTATATGCGCTCGACTTATCTTCAAATTACCTCACAGGAAAAATTCCAAAGGAGTTAGGTAACTTGACTTCATTGTCCAAACTTTTGATACACAACAACCGTCTTTCAGGAAACGTTCCTGTACAAATAACATCACTAAAGAAACTTGAGACGTTAAATCTCGCTGTAAATGATCTAAGTGGCTTCATCACAAAACAACTTGGATATTTTCCTAGATTACGTGACATGAATTTGAGCCACAACAAATTCAAAGGAAATATTCCTGTTGAGTTTGGCCAATTTAAAGTCCTTCAAAGTCTTGATCTTAGTGGGAATTTTCTCAATGGAACAATACCGTCAACGCTTGCTCAACTGATATACTTAGAGTCATTTAATATATCACATAATAACCTCTCTGGATTTATTCCCTCAAACTTTGATCATATGCTCAGTTTGTTATCGGTTGACATATCGTTTAACCAATTAGAGGGTCCGGTTCCAAACATTCCAGCTTTCAATAAAGCAACCATTGAAGTTTTGAGAAATAATAGAAGACTGTGTGGTAATGTTTCTGGATTGGAGCCTTGCTCAAAAGCAAGCGGTACTAGATCTCATAATCATAAGAAAGTCTTATTGATTGTTTTACCACTTGCAATTGGAACTGTAATACTAGTATTAGTTTGTTTCAAATTCTCGCATCTTTGCAATAAGTCAACCACGATACAATACCTGGCTCGAAGGAACACATTCGATACTCAAAATCTATTTACCATATGGAGTTTTGATGGAAAAATGGTGTATGAGAATATTATTGAAGCCACAGAAGATTTTGATGATAAACATCTCATCGGAGTTGGAGGACAGGGAAGTGTTTACAAAGCAGTGTTAGACACGGGTCAAGTAGTGGCTGTGAAAAAACTCCATTCAGTAATAGATGAAGAAGATTCCAGCTTAAAATCTTTCACAAGTGAGGTCCAAGCTCTGATAGAAATTCGACATCGTAACATTGTGAAGCTGTATGGATTTTGTTTGCATTCACGATTCTCGTTTTTGGTTTATGATTTCATGGGAAGAGGAAGTGTAGATAACATGTTGAAAGATGATGATCAAGCACTTGCATTTGACTGGAATAAGAGGCTGAATGTCATTAAAGATATAGCTAATGCTTTATGTTATATGCATCATCATTGCTCACCTCCGATTGTTCATCGAGATATATCAAGCAAGAATATACTTCTAAATTTGGAATATGTGGCTCATGTCTCTGACTTTGGAATAGCTAAGCTTCTTAATCCTGATTCAACCAATTGGACCTCATTTGCAGGAACCATTGGATATGCTGCTCCAGAATATGCATATACAATGCAAGTGAATGAGAAATGTGATGTGTATAGTTTTGGAGTGTTAGCATTGGAAATACTCTTTGGAAAACACCCAGGAGGTTTTATATATCATTCCTCACTATCACCTCTGTGGAAAATTGTGGGCAACTTACTTGATGATATGTCGTTGATGGATAAGTTGGATCAACGTCTCCCTCGTCCGTTGAATCCTTTTGTTAATGAATTAGTATCGATTGCAAGGATCGCAATTGTCTGCTTGACTGAAAGTTCACAATCTCGCCCTACCATGGATCAGGTCACCCAACAACTTGCAATGTCATATTTGTCTACAGTGGATTAG 2865 0.3623 MKTSPMLFLFSTFQSIKFLAICFCAFIMASSTYVSSSSSTINVKSREASSLLKWKSNLEIESQALLSSWTGNNSCNWLGITCDEDHKFVTNVNLTNMGLKGTLETLNFSSFPNILTLNLSGNFLNGSIPPDIDVLSKLSHLDLSNNDLSGHIPFSIGKLANLMYLNLAKNQISGHIPKEIEKSMNLKFLILSLNNLSGHIPVEIGKLISMNYLRLSDNNLSGFIPREIGTMKNLLEINLSNNSLSGKLPPTIGNLSNLQNLFIFSNHLTGKLPTEINKLSNLVTFLIFYNNFSGQLPHNICTGGNLKYFSVLDNHFTGPVPMSLKNCSSIVRIRLEQNQLSGNITDFFGVYPNLDYMHLSQNNFYGHISPKWGKCRSLTFLNISNNNISGGIPPELGEATNLYALDLSSNYLTGKIPKELGNLTSLSKLLIHNNRLSGNVPVQITSLKKLETLNLAVNDLSGFITKQLGYFPRLRDMNLSHNKFKGNIPVEFGQFKVLQSLDLSGNFLNGTIPSTLAQLIYLESFNISHNNLSGFIPSNFDHMLSLLSVDISFNQLEGPVPNIPAFNKATIEVLRNNRRLCGNVSGLEPCSKASGTRSHNHKKVLLIVLPLAIGTVILVLVCFKFSHLCNKSTTIQYLARRNTFDTQNLFTIWSFDGKMVYENIIEATEDFDDKHLIGVGGQGSVYKAVLDTGQVVAVKKLHSVIDEEDSSLKSFTSEVQALIEIRHRNIVKLYGFCLHSRFSFLVYDFMGRGSVDNMLKDDDQALAFDWNKRLNVIKDIANALCYMHHHCSPPIVHRDISSKNILLNLEYVAHVSDFGIAKLLNPDSTNWTSFAGTIGYAAPEYAYTMQVNEKCDVYSFGVLALEILFGKHPGGFIYHSSLSPLWKIVGNLLDDMSLMDKLDQRLPRPLNPFVNELVSIARIAIVCLTESSQSRPTMDQVTQQLAMSYLSTVD 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01230 954 Gene3D Transferase(Phosphotransferase) domain 1 750 951 - -
Mepo3g01230 954 Gene3D Phosphorylase Kinase; domain 1 632 749 - -
Mepo3g01230 954 FunFam Leucine-rich repeat receptor protein kinase EMS1 200 299 - -
Mepo3g01230 954 FunFam Leucine-rich repeat receptor protein kinase MSP1 635 749 - -
Mepo3g01230 954 FunFam MDIS1-interacting receptor like kinase 2 750 951 - -
Mepo3g01230 954 SUPERFAMILY Protein kinase-like (PK-like) 644 945 IPR011009 -
Mepo3g01230 954 ProSiteProfiles Protein kinase domain profile. 671 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01230 954 Gene3D Ribonuclease Inhibitor 211 362 IPR032675 -
Mepo3g01230 954 Pfam Leucine rich repeat N-terminal domain 46 83 IPR013210 -
Mepo3g01230 954 Pfam Leucine rich repeat 498 556 IPR001611 GO:0005515
Mepo3g01230 954 PANTHER LEUCINE RICH REPEAT KINASE 2 228 948 - -
Mepo3g01230 954 Pfam Protein kinase domain 672 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01230 954 Gene3D Ribonuclease Inhibitor 463 591 IPR032675 -
Mepo3g01230 954 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 300 594 - -
Mepo3g01230 954 Pfam Leucine Rich Repeat 233 255 IPR001611 GO:0005515
Mepo3g01230 954 Pfam Leucine Rich Repeat 137 159 IPR001611 GO:0005515
Mepo3g01230 954 SUPERFAMILY L domain-like 314 582 - -
Mepo3g01230 954 SUPERFAMILY L domain-like 73 389 - -
Mepo3g01230 954 FunFam Nuclear pore complex protein NUP107 44 191 - -
Mepo3g01230 954 Gene3D Ribonuclease Inhibitor 44 203 IPR032675 -
Mepo3g01230 954 Gene3D Ribonuclease Inhibitor 363 462 IPR032675 -
Mepo3g01230 954 ProSitePatterns Tyrosine protein kinases specific active-site signature. 795 807 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01230 Mepo-Chr3 18600963 18604006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01230 89 843 Receptor kinase-like Gene Family AT4G08850 44.415 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g01230 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01230 - - psat:127129328 1095.88