Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01229 ATGAAGACTTCATCCATGATATTCATTTTTTCAACCTTTCAGTCTATAAAGCTTCTTGCAATATGTTTTGGTGCATTCATGATGGCCTCTTCAACACATATTTCGTCTTCTTCGACCGTTAATGTAAAAAGTAGAGAAGCAAGTTCTTTGTTGAAGTGGAAAAGCAACCTTGAAATGGAAAGCCAAGCTTTGTTATCTTCATGGACCGGCAACAATTCATGTAACTGGCTGGGAATTAAATGTGATGAAGATAACATATTTGTCACCAATGTAAATCTCACAAATATGGGATTAAAAGGTACACTTGAAACTCTTAACTTCTCATCATTTCTAAATATACTCACTCTTGATCTTAGTGGAAACTTCTTGAATGGAAGTATTCCTCCCGATATTGACGCGTTGTTGAAACTATCCCATCTTGATATCAGTAACAATGATCTCTCAGGATCAATCCCATATGAAATAACAAAGTTGACCAATCTTCATATTTTATATTTGGATAATAATGTTTTCAGTGGTTCCATTCCTGAAGAAATAGGTATACTGAGAAATCTGAAAGAGCTTAGTATTTCATACGCGAATCTCATAGGGACTATCCCAATTTCGATCGGGAACTTATCTATCTTGTCACACTTGTATCTAGGAGGCAACAACCTTATAGGAAACATTCCAAAAGAAATTTGGAATTTGAGCAACTTAAACTACTTAGCTGTTGAAAAAAACAAATTTAATGGTTCTATAATTGCCCAAGATATTTTGAACTTACATAATCTAGAGACTCTAGATCTCGGTGATAATGATCTTTCCATCATTGGTCCCATCCTGGAAGAGTTGTGGAAGCTGGAAAATTTGACATACCTTTCTCTTTCACTTTGCAAAGTCAAAGGGCATATCCCATTTTCTATAGGGAAGTTGGCTAAATTGTTGTATCTAAATTTAGCAAATAACCAAATTTCTGGCCACATCCCTAAGGAAATTGGGAAGTCACTGAACCTAAAATTTCTCTCTCTTTCTCAGAACCATTTATCTGGTCCTATTCCTGTGGAAATTGGGAAATTGATCAACATGAACAATTTAAGGCTTAGTGACAATAGCCTTTCCGGTTTCATTCCCCGTGAAATTGGAACGATGAGAAATTTGCTTGAAATTAATTTGTCCAATAACTCTCTATCAGGTAAAATCCCACCTACAATAGGAAACATGAGCAAATTACAAAACCTTACCATATTTTCAAACCATCTCACTGGGCCACTTCCAACAGAAATCAACAAGCTTTCCAATTTGGCATATTTCTTTATATTTAATAACAATTTCACTGGTCAGCTCCCACACAATATTTGCATTGGTGGAAACCTGAAATTCTTTGCTGTTTTGGAGAACCACTTCACTGGTCCTGTTCCGATGAGTTTGAAGAATTGCTCTAGTATTATAAGAATTAGGCTTGAAAAAAACCAACTATCTGGAAATATAACAGATTTCTTTGGTGCGTATCCAAATTTGTACTACATGCAGTTGAGTGAAAATAAATTTTATGGCCACATTTCACCTAACTGGGGAAAATGTCGTAGCCTGGCATTCCTCAACATCTCCAATAATAACATATCAGGTGGTATACCACCAGAACTAGGCGAGGCAACCAATTTATATTCACTCGACTTATCTTCAAACCACCTTACAGGAAAAATTCCAAAGGAGTTAGGAAACTTGACTTCATTGTCTAAACTCTTGATAAGCAACAACCATCTAACAGGAAACATTCCGGGACAAATAACATCACTAAAGGAACTTGAGACGTTAAATCTTGCAGCAAATGATCTTAGCGGCTTCGTCACTAAACAACTTGGATATTTTCCTAGATTACGTGACATGAATTTGAGCCACAACAAATTCAAAGGAAATATTCCTGTTGTGTTTGGCCAATTTAAAGTCCTTCAAAGTCTTGATCTTAGCGGGAATTTTCTCAACGGAACAATACCGTTAACACTTACACAACTGATATACTTAGAGTCATTGAATATATCACATAATAACCTTTCTGGATTTATTCCCTCAAAGTTTGATCAGATGCTCAGCTTGTTAACTGTTGACATATCATTTAACCAATTTGAGGGTCCAGTTCCAAACATTCCAGCTTTCTATAAAGCTACTATTGAAGTTTTGAGAAATAATAAAAGACTGTGTGGCAATGTCTCTGGCCTGGAGCCTTGCCCAACATCAAGCGGTACTAGATCTCATAATCATAAGAAAGTCTTATTGATTGTTTTACCACTTGCAATTGGAACTCTAATACTAGTATTAGTTTGTTTCAAATTCTCGCATCTCTGCAAAAATTCAACCATGCGAGAATACCTGGCTCGAAGGAACACTCTTGATACTCAAAATCTATTTACCATATGGAGTTTTGATGGCAAAATGGTGTATGAGAATATTATTCAAGCCACAGAAGATTTTGATGATAAACATCTCATCGGAGTTGGAGGGCATGGAAGTGTTTACAAAGCAGAATTAGACACAGGTCAAGTAGTTGCAGTTAAAAAACTCCATTCAATAGTAGATGAAGAAAATTCAAACCTAAAATCTTTCACAAGTGAGATCCAAGCACTGACAGAAATTCGACATCGTAACATTGTAAAACTGCATGGATTTTGTTTGCATTCTCTAGTCTCATTTTTGGTCTACGAATACATGGGAAAAGGAAGCGTAGAAAATATTTTGAAAGATGATGATCAAGCAATTGCATTTGACTGGAATAAGAGGGTGAATGCCATTAAAGATATAGCTAATGCTTTATGTTATATGCATCATCATTGCTCACCTCCGATTGTTCATCGAGATATATCAAGCAAGAATATACTTCTAGACTTGGAATATGTAGCTCATGTCTCTGACTTTGGAATAGCTAAGCTTCTTAATCCTGATTCAACCAATTGGACCTCATTTGCAGGAACCTATGGATATGCTGCACCAGAATATGCATACACAATGCAAGTGAATGAGAAATGTGATGTGTATAGTTTTGGAGTGTTAGCATTGGAAATACTCTTTGGAAAACACCCAGGAGGTTTTATATATCATTCCTCACTATCACCTTTGTGGAAAATTGTGGGCAACTTACTTGACGATATATCGTTGATGGATAAGTTGGATCAACGTCTCCCTCATCCTTTGAATCCTTCTGTTAATGAGTTAGTATCAATTGCAAGGATCGCAATTGTCTGCTTGACTGAAAGTTCACAATCTCGCCCTACCATGGAGCAGGTCACCCAACAACTTGCAATGTCATATTTGTCTACAGTGGATTAG 3303 0.363 MKTSSMIFIFSTFQSIKLLAICFGAFMMASSTHISSSSTVNVKSREASSLLKWKSNLEMESQALLSSWTGNNSCNWLGIKCDEDNIFVTNVNLTNMGLKGTLETLNFSSFLNILTLDLSGNFLNGSIPPDIDALLKLSHLDISNNDLSGSIPYEITKLTNLHILYLDNNVFSGSIPEEIGILRNLKELSISYANLIGTIPISIGNLSILSHLYLGGNNLIGNIPKEIWNLSNLNYLAVEKNKFNGSIIAQDILNLHNLETLDLGDNDLSIIGPILEELWKLENLTYLSLSLCKVKGHIPFSIGKLAKLLYLNLANNQISGHIPKEIGKSLNLKFLSLSQNHLSGPIPVEIGKLINMNNLRLSDNSLSGFIPREIGTMRNLLEINLSNNSLSGKIPPTIGNMSKLQNLTIFSNHLTGPLPTEINKLSNLAYFFIFNNNFTGQLPHNICIGGNLKFFAVLENHFTGPVPMSLKNCSSIIRIRLEKNQLSGNITDFFGAYPNLYYMQLSENKFYGHISPNWGKCRSLAFLNISNNNISGGIPPELGEATNLYSLDLSSNHLTGKIPKELGNLTSLSKLLISNNHLTGNIPGQITSLKELETLNLAANDLSGFVTKQLGYFPRLRDMNLSHNKFKGNIPVVFGQFKVLQSLDLSGNFLNGTIPLTLTQLIYLESLNISHNNLSGFIPSKFDQMLSLLTVDISFNQFEGPVPNIPAFYKATIEVLRNNKRLCGNVSGLEPCPTSSGTRSHNHKKVLLIVLPLAIGTLILVLVCFKFSHLCKNSTMREYLARRNTLDTQNLFTIWSFDGKMVYENIIQATEDFDDKHLIGVGGHGSVYKAELDTGQVVAVKKLHSIVDEENSNLKSFTSEIQALTEIRHRNIVKLHGFCLHSLVSFLVYEYMGKGSVENILKDDDQAIAFDWNKRVNAIKDIANALCYMHHHCSPPIVHRDISSKNILLDLEYVAHVSDFGIAKLLNPDSTNWTSFAGTYGYAAPEYAYTMQVNEKCDVYSFGVLALEILFGKHPGGFIYHSSLSPLWKIVGNLLDDISLMDKLDQRLPHPLNPSVNELVSIARIAIVCLTESSQSRPTMEQVTQQLAMSYLSTVD 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01229 1100 FunFam Nuclear pore complex protein NUP107 43 200 - -
Mepo3g01229 1100 ProSitePatterns Tyrosine protein kinases specific active-site signature. 941 953 IPR008266 GO:0004672|GO:0006468
Mepo3g01229 1100 Pfam Leucine Rich Repeat 379 400 IPR001611 GO:0005515
Mepo3g01229 1100 Pfam Leucine Rich Repeat 547 569 IPR001611 GO:0005515
Mepo3g01229 1100 Pfam Leucine Rich Repeat 668 686 IPR001611 GO:0005515
Mepo3g01229 1100 ProSiteProfiles Leucine-rich repeat profile. 257 278 IPR001611 GO:0005515
Mepo3g01229 1100 Pfam Protein kinase domain 818 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01229 1100 Gene3D Ribonuclease Inhibitor 354 424 IPR032675 -
Mepo3g01229 1100 Gene3D Ribonuclease Inhibitor 45 155 IPR032675 -
Mepo3g01229 1100 PANTHER LEUCINE RICH REPEAT KINASE 2 374 1094 - -
Mepo3g01229 1100 SUPERFAMILY RNI-like 390 710 - -
Mepo3g01229 1100 SMART LRR_typ_2 641 665 IPR003591 -
Mepo3g01229 1100 SMART LRR_typ_2 569 593 IPR003591 -
Mepo3g01229 1100 SMART LRR_typ_2 377 401 IPR003591 -
Mepo3g01229 1100 SMART LRR_typ_2 158 182 IPR003591 -
Mepo3g01229 1100 SMART LRR_typ_2 305 329 IPR003591 -
Mepo3g01229 1100 SMART LRR_typ_2 255 278 IPR003591 -
Mepo3g01229 1100 SMART LRR_typ_2 206 230 IPR003591 -
Mepo3g01229 1100 ProSiteProfiles Protein kinase domain profile. 817 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01229 1100 Pfam Leucine rich repeat 571 630 IPR001611 GO:0005515
Mepo3g01229 1100 Gene3D Phosphorylase Kinase; domain 1 778 895 - -
Mepo3g01229 1100 FunFam Receptor-like protein kinase 7 216 449 - -
Mepo3g01229 1100 ProSitePatterns Protein kinases ATP-binding region signature. 823 846 IPR017441 GO:0005524
Mepo3g01229 1100 SUPERFAMILY Protein kinase-like (PK-like) 791 1091 IPR011009 -
Mepo3g01229 1100 Coils Coil 851 871 - -
Mepo3g01229 1100 Gene3D Ribonuclease Inhibitor 425 739 IPR032675 -
Mepo3g01229 1100 FunFam Uncharacterized protein 450 746 - -
Mepo3g01229 1100 FunFam Leucine-rich repeat receptor protein kinase MSP1 780 895 - -
Mepo3g01229 1100 Gene3D Ribonuclease Inhibitor 250 350 IPR032675 -
Mepo3g01229 1100 Gene3D Ribonuclease Inhibitor 156 249 IPR032675 -
Mepo3g01229 1100 Pfam Leucine rich repeat N-terminal domain 45 82 IPR013210 -
Mepo3g01229 1100 Gene3D Transferase(Phosphotransferase) domain 1 896 1097 - -
Mepo3g01229 1100 SUPERFAMILY RNI-like 90 415 - -
Mepo3g01229 1100 FunFam MDIS1-interacting receptor like kinase 2 896 1097 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01229 Mepo-Chr3 18594946 18598469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01229 34 989 Receptor kinase-like Gene Family AT4G08850 41.262 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g01229 Pkinase 3.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01229 - - tpra:123888271 1201.42