Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01228 ATGGCTAGTCAACAATCTTTGCTAGACAAGCCTAGAAAATCTCTTCCCAAAACTTTTTGGTTAATCCTCTCTTTAGTTGCTATCATAAGTTCATCAGCCCTTATTATTTCTCATCTAAACAAACCTATTTCCTTCATCAATCTCTCATCAGCTCCTAATCTATGTGAGCATGCTCTTGATACAAATTCATGCTTAACTCATGTAGCAGAAGTATCTCACGTCTCAACTTTGGTCACAACAAAAGACCAAAACTTGCATGTACTCTTGTCCTTATTAACCAAGTCCACCGCACACATTAAAAAAACCATGGACACGACCAATGTTATCAAACGCCGAATTAACAGCCCTAGAGAAGAAATTGCTTTGAGTGACTGTGAACAACTAATGGACTTGTCCATGAACAGAATTTGGGACTCGATGTTAAAGCTAACAAAAAATAATATTGACTCGCATCAAGATGCACATACATGGCTAAGCAGTGTGCTCACTAACCATGCAACTTGCTTGGATGGATTAGAAGGTACATCTCGGGCCGTTATGGAAAATGACCTTCAAGACTTGATATCCAGGGCTAGATCTTCCCTAGCTGTGTTTCTTGCCGTTTTTCCTCAAAAGGATCATGACCAATTCATTGATGAAACATTGATTGGAGAATTTCCTTCCTGGGTTACAAGCAAAGATAGGAGGCTTTTGGAGTCCGCGGTTGGGGACATAAAGGCAAATGTTGTGGTGGCTCAGGATGGGAGTGGCAAGTTCAAGACTGTGGCTGAGGCTGTGGCATCTGCACCTGACAACGGTAAGACAAAGTATGTTATCTATGTGAAAAAGGGAACATACAAAGAGAACATTGAAATTGGTTCTAAAAAAACAAATGTTATGCTTGTTGGTGATGGTATGGATGCAACAATAATCACAGGCAACTTAAATTTCATTGATGGTACAACCACCTTCAAAAGTTCAACTGTCGCTGCGGTTGGGGATGGATTTATGGCACAAGACATTTGGTTCCAAAATACAGCAGGAGCAGCGAAGCACCAGGCAGTGGCTCTCCGTGTTGGCTCTGACCAATCTGTCATCAACCGTTGCCGCATTGACGCCTTTCAAGATACTCTTTACGCACACTCCAACCGGCAATTTTACCGTGACTCTGTCATTACAGGTACCATTGACTTCATCTTTGGAAACGCAGCTGTTGTGTTCCAGAAATGCAAGTTGGTGGCCCGAAAGCCCATGGCCAACCAAAACAACATGTTTACAGCCCAAGGTCGAGAAGACCCCGGTCAAAACACAGGAACTTCAATTCAACAATGTGACCTAACACCAAGTTCAGACCTTAAGCCCGTTGCAGGCTCCATCAAAACATTCTTGGGTCGCCCGTGGAAGAAATACTCAAGGACTGTTGTGATGCAATCCTTTCTGGACAGCCACATTGACCCAACAGGATGGGCTGAATGGGATGCCGCGAGTAAGGACTTTCTGCAGACACTATACTACGGAGAGTACTTGAACAACGGGCCAGGTGCTGGTACTGCCAAAAGAGTGACTTGGCCAGGTTATCATGTCATCAAAACTGCTGCAGAGGCTAGCAAGTTTACAGTAGCACAACTAATCCAAGGTAATGTTTGGTTGAAGAACACAGGGGTGGCCTTTACTGAGGGCTTGTAA 1665 0.4366 MASQQSLLDKPRKSLPKTFWLILSLVAIISSSALIISHLNKPISFINLSSAPNLCEHALDTNSCLTHVAEVSHVSTLVTTKDQNLHVLLSLLTKSTAHIKKTMDTTNVIKRRINSPREEIALSDCEQLMDLSMNRIWDSMLKLTKNNIDSHQDAHTWLSSVLTNHATCLDGLEGTSRAVMENDLQDLISRARSSLAVFLAVFPQKDHDQFIDETLIGEFPSWVTSKDRRLLESAVGDIKANVVVAQDGSGKFKTVAEAVASAPDNGKTKYVIYVKKGTYKENIEIGSKKTNVMLVGDGMDATIITGNLNFIDGTTTFKSSTVAAVGDGFMAQDIWFQNTAGAAKHQAVALRVGSDQSVINRCRIDAFQDTLYAHSNRQFYRDSVITGTIDFIFGNAAVVFQKCKLVARKPMANQNNMFTAQGREDPGQNTGTSIQQCDLTPSSDLKPVAGSIKTFLGRPWKKYSRTVVMQSFLDSHIDPTGWAEWDAASKDFLQTLYYGEYLNNGPGAGTAKRVTWPGYHVIKTAAEASKFTVAQLIQGNVWLKNTGVAFTEGL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01228 554 FunFam Pectinesterase 235 554 - -
Mepo3g01228 554 Pfam Plant invertase/pectin methylesterase inhibitor 53 186 IPR006501 GO:0004857
Mepo3g01228 554 CDD PMEI-like_4 57 201 - -
Mepo3g01228 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 185 IPR035513 -
Mepo3g01228 554 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Mepo3g01228 554 Pfam Pectinesterase 241 540 IPR000070 GO:0030599|GO:0042545
Mepo3g01228 554 SUPERFAMILY Pectin lyase-like 239 553 IPR011050 -
Mepo3g01228 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 202 IPR035513 -
Mepo3g01228 554 PANTHER PECTINESTERASE 29 544 - -
Mepo3g01228 554 SMART PMEI_2 46 197 IPR006501 GO:0004857
Mepo3g01228 554 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Mepo3g01228 554 Gene3D - 235 554 IPR012334 -
Mepo3g01228 554 NCBIfam pectinesterase inhibitor domain 24 182 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01228 Mepo-Chr3 18590049 18592205 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01228 3 554 Carbohydrate Esterase AT1G11580 56.838 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01228 K01051 - gmx:100815836 863.988