Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01224 ATGGCTAGCCAACAATCTTTGCTAGACAAGCCAAGAAAATCCATTCCAAAAACATTTTGGTTAATCCTCTCTTTAGTTGCTATCATAAGTTCATCAGCCCTTATTATTTCTCATCTAAACAAACCTATTTCCTTCATCAATCTCTCATCAGCTCCTAATCTATGTGAGCATGCTCTTGATACAAATTCATGCTTAACTCATGTAGCAGAAGTTGTTCAAGGTTCAACCATTTCCAATGCCAAAGACCACAAATTGAGTACACTCGTATCGTTGTTAACCAAATCCACCGAACACATTCGAAAGGCAATGGACACGGCTAATGTTATCAAACGCCGTGTTAATAGCCCTAGAGAGGAAATTGCTTTGAATGACTGTGAGGAATTAATGGATTTGTCCATTGATAGAGTTTGGGACTCAGTGTTGACTCTGACAAAAAATAACATTGACTCACAACATGATGCACACACATGGCTGAGTAGTGTGCTCACTAACCATGCAACTTGCTTGGATGGATTAGAAGGTTCATCTCGGGTCGTTATGGAAAGTGATCTTCAGGACTTGATCTCCAGAGCTAGATCTTCTCTTGCAGTGCTTGTTTCTGTCTTGCCTCCAAAGGTTAACGACGGATTCATTGATGAAAAACTGAATGGCGACTTCCCCTCTTGGGTGACAAGTAAGGATCGAAGGCTTTTGGAATCTTCAGTTGGGGATATAAAGGCTAATGTTGTGGTGGCTCAGGACGGGAGCGGCAAGTTCAAGACTGTGGCTCAAGGTGTGGCATCTGCACCAGACAACGGTAAGACAAGGTATGTTATCTATGTGAAAAAGGGAACATACAAAGAGAACATAGAAATTGGCAAGAAAAAGACAAATGTGATGCTCGTGGGAGATGGTATGGATGCAACAATAATCACAGGCAGCTTAAATTTCATCGATGGAACAACCACCTTCAAAAGTGCAACTGTTGCTGCTGTTGGGGATGGGTTTATAGCTCAGGACATTGGATTCCAAAACACGGCAGGTCCACAGAAGCATCAGGCAGTTGCTCTGCGCGTCGGTTCTGATCGATCTGTCATTAACCGCTGCAAAATTGATGCATTTCAAGACACGCTCTACGCACACACCAACCGACAATTTTACCGTGACTCCTTCATTACCGGTACCATTGACTTTATCTTTGGAGACGCAGCTGTTGTGTTGCAGAAGTGCAAACTCGTGGCCCGAAAGCCCATGGCCAACCAAAACAACATGGTCACAGCCCAGGGTCGATTAGACCCAAACCAGAACACTGCAACATCAATTCAGCAATGCGATGTAATACCAAGCACGGATCTCAAACCTGTGATAGGCTCCATCAAAACTTACTTAGGCCGCCCATGGAAGAAATACTCCAGGACTGTTGTGATGCAGTCCTTGTTAGGAGCCCACATTGACCCAACAGGATGGGCTGAATGGGATGCCGCGAGTAAGGACTTTCTCCAAACATTGTATTACGGAGAGTACAAGAACAGCGGACCCGGTGCTGGTACCAGCAAGAGAGTGAAATGGCCTGGTTATCATATCATCAATGCTGCCGAGGCAAACAAGTTTACAGTGGCCCAACTCATCCAAGGTAATGTTTGGTTGAAGAACACCGGGGTGGCCTTCATCGAAGGCCTTTAG 1662 0.4471 MASQQSLLDKPRKSIPKTFWLILSLVAIISSSALIISHLNKPISFINLSSAPNLCEHALDTNSCLTHVAEVVQGSTISNAKDHKLSTLVSLLTKSTEHIRKAMDTANVIKRRVNSPREEIALNDCEELMDLSIDRVWDSVLTLTKNNIDSQHDAHTWLSSVLTNHATCLDGLEGSSRVVMESDLQDLISRARSSLAVLVSVLPPKVNDGFIDEKLNGDFPSWVTSKDRRLLESSVGDIKANVVVAQDGSGKFKTVAQGVASAPDNGKTRYVIYVKKGTYKENIEIGKKKTNVMLVGDGMDATIITGSLNFIDGTTTFKSATVAAVGDGFIAQDIGFQNTAGPQKHQAVALRVGSDRSVINRCKIDAFQDTLYAHTNRQFYRDSFITGTIDFIFGDAAVVLQKCKLVARKPMANQNNMVTAQGRLDPNQNTATSIQQCDVIPSTDLKPVIGSIKTYLGRPWKKYSRTVVMQSLLGAHIDPTGWAEWDAASKDFLQTLYYGEYKNSGPGAGTSKRVKWPGYHIINAAEANKFTVAQLIQGNVWLKNTGVAFIEGL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01224 553 CDD PMEI-like_4 57 201 - -
Mepo3g01224 553 Gene3D - 235 553 IPR012334 -
Mepo3g01224 553 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Mepo3g01224 553 SMART PMEI_2 46 197 IPR006501 GO:0004857
Mepo3g01224 553 FunFam Pectinesterase 235 553 - -
Mepo3g01224 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 202 IPR035513 -
Mepo3g01224 553 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Mepo3g01224 553 Pfam Plant invertase/pectin methylesterase inhibitor 53 191 IPR006501 GO:0004857
Mepo3g01224 553 Pfam Pectinesterase 241 539 IPR000070 GO:0030599|GO:0042545
Mepo3g01224 553 SUPERFAMILY Pectin lyase-like 239 552 IPR011050 -
Mepo3g01224 553 NCBIfam pectinesterase inhibitor domain 24 181 IPR006501 GO:0004857
Mepo3g01224 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 178 IPR035513 -
Mepo3g01224 553 PANTHER PECTINESTERASE 29 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01224 Mepo-Chr3 18516256 18555339 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01224 3 553 Carbohydrate Esterase AT1G11580 55.595 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01224 K01051 - gmx:100815836 852.432